Biology Department, KO Science Faculty of Karamanoglu Mehmetbey University, Karaman, Turkey.
J Eukaryot Microbiol. 2023 Nov-Dec;70(6):e12993. doi: 10.1111/jeu.12993. Epub 2023 Aug 1.
Microbial diversity found in hypersaline ecosystems is structurally unique and essential in many microbiological and ecological processes. Tuz Lake, the second biggest lake in Türkiye, is a talassohaline (over 32% [w/v]) lake with near-neutral pH. The aim of study was to investigate the composition of the eukaryotic microbial community in Tuz Lake by 18S rDNA amplicon sequencing, as well as its relationship and change with environmental factors during 1-year period. Next-generation sequencing and bioinformatic analysis were applied to describe the eukaryotic microbial community in Tuz Lake. As a result of bioinformatics analysis, Archaeplastida (39%) and Stramenopiles, Alveolata, Rhizaria (SAR) (51%) were the most abundant taxa represented in the dataset. The Archaeplastida phylum showed a significant difference between winter and summer and higher abundance in summer in contrast to the SAR group, which represented higher abundance in winter. Genus level assessment showed that the most abundant genera were Navicula, Chlorophyta;unclassified_taxa, Dunaliella, Cladosporium, Paraphelidium, Scuticociliates;unclassified_taxa, and Chlamydomonadales;unclassified_taxa. Navicula abundance was significantly different and overwhelmingly dominant in winter. On the other hand, Cladosporium and Chlorophyta; unclassified_taxa represented a significant difference between seasons and high abundance in summer. Furthermore, Dunaliella populations were not detected in midsummer and early fall when the temperature increased and water volume in the lake decreased.
在高盐度生态系统中发现的微生物多样性在许多微生物学和生态学过程中具有结构独特性和重要性。土耳其第二大湖泊图兹湖是一个盐度超过 32%(w/v)、接近中性 pH 的盐湖。本研究的目的是通过 18S rDNA 扩增子测序来研究图兹湖中真核微生物群落的组成,以及在 1 年期间其与环境因素的关系和变化。应用下一代测序和生物信息学分析来描述图兹湖中真核微生物群落。生物信息学分析的结果表明,Archaeplastida(39%)和Stramenopiles、Alveolata、Rhizaria(SAR)(51%)是数据集内最丰富的类群。Archaeplastida 门在冬季和夏季之间存在显著差异,夏季的丰度高于 SAR 组,而 SAR 组在冬季的丰度更高。属水平评估表明,最丰富的属是 Navicula、Chlorophyta;unclassified_taxa、Dunaliella、Cladosporium、Paraphelidium、Scuticociliates;unclassified_taxa 和 Chlamydomonadales;unclassified_taxa。Navicula 的丰度在冬季差异显著且占主导地位。另一方面,Cladosporium 和 Chlorophyta;unclassified_taxa 在季节之间存在显著差异,夏季丰度较高。此外,当温度升高和湖泊水量减少时,Dunaliella 种群在仲夏和初秋并未被检测到。