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定量分子检测发现意外诊断:病例报告。

An Unexpected Diagnosis Uncovered by Quantitative Molecular Findings: A Case Report.

机构信息

Division of Laboratory Genetics and Genomics, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota.

Division of Anatomic Pathology, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota.

出版信息

J Natl Compr Canc Netw. 2023 Aug;21(8):787-791. doi: 10.6004/jnccn.2023.7014.

DOI:10.6004/jnccn.2023.7014
PMID:37549909
Abstract

A 74-year-old male presented with rectal pain; workup uncovered an anal mass, and a diagnosis of melanoma was rendered via histologic examination and immunohistochemical (IHC) studies. Droplet digital PCR (ddPCR)-based BRAF testing was performed and revealed the presence of BRAF V600E, which is a common targetable genetic alteration in melanoma. Interestingly, the ratio of mutant to wild-type copy number was low (0.3%), whereas tumor cell percentage on tissue slides was 90%. With additional workup, BRAF V600E IHC confirmed a very small subset of BRAF V600E-positive cells, and a next-generation sequencing (NGS) panel revealed a pathogenic KIT variant, p.L576P, with an allele frequency of 63%. It was initially hypothesized that the main driver of the melanoma was the KIT alteration, whereas a small subclone (not detected by NGS, which has a 5% limit of detection) was driven by the BRAF V600E detected by ddPCR. To determine whether there were morphologic differences between the 2 clones, a careful review of the histology was performed and revealed distinct morphology of the BRAF V600E-positive cells, including pale cytoplasm, nuclear grooves, and infiltrating eosinophils. Additional IHC workup of the BRAF V600E-positive cells showed coexpression of CD1a, Langerin, and S100, diagnostic of Langerhans cell histiocytosis (LCH). This diagnosis was unexpected and would have been missed without highly sensitive molecular testing; yet it is of clinical importance for the patient. This case raises interesting biology questions regarding the relationship between melanoma and LCH; moreover, it highlights the importance of integrating quantitative information in molecular data interpretation.

摘要

一位 74 岁男性出现直肠疼痛;通过检查发现了一个肛门肿块,并通过组织学检查和免疫组织化学(IHC)研究诊断为黑色素瘤。进行了基于液滴数字 PCR(ddPCR)的 BRAF 检测,结果显示存在 BRAF V600E,这是黑色素瘤中常见的可靶向遗传改变。有趣的是,突变型与野生型拷贝数的比例较低(0.3%),而组织切片上的肿瘤细胞百分比为 90%。通过进一步检查,BRAF V600E IHC 证实了一小部分 BRAF V600E 阳性细胞,下一代测序(NGS)面板显示存在致病性 KIT 变体 p.L576P,其等位基因频率为 63%。最初的假设是,黑色素瘤的主要驱动因素是 KIT 改变,而一小部分亚克隆(未被 NGS 检测到,其检测限为 5%)则由 ddPCR 检测到的 BRAF V600E 驱动。为了确定这 2 个克隆之间是否存在形态学差异,对组织学进行了仔细检查,结果显示 BRAF V600E 阳性细胞具有明显的形态学特征,包括淡染的细胞质、核沟和浸润的嗜酸性粒细胞。对 BRAF V600E 阳性细胞进行的额外 IHC 检测显示 CD1a、Langerin 和 S100 的共表达,诊断为朗格汉斯细胞组织细胞增生症(LCH)。如果没有高度敏感的分子检测,这种诊断是出乎意料的,也会被遗漏;但对患者来说具有重要的临床意义。该病例提出了有关黑色素瘤和 LCH 之间关系的有趣生物学问题;此外,它强调了在分子数据分析解释中整合定量信息的重要性。

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