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利用表面等离子体共振研究 SH2 结构域-肽相互作用。

Using Surface Plasmon Resonance to Study SH2 Domain-Peptide Interactions.

机构信息

The Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, Australia.

Monash Institute of Pharmaceutical Sciences, Monash University, Melbourne, VIC, Australia.

出版信息

Methods Mol Biol. 2023;2705:199-210. doi: 10.1007/978-1-0716-3393-9_10.

DOI:10.1007/978-1-0716-3393-9_10
PMID:37668975
Abstract

Biosensor measurement using surface plasmon resonance enables precise evaluation of peptide-protein interactions. It is a sensitive technique that provides kinetic and affinity data with very little sample and without the need for analyte labels. Here, we describe its application for the analysis of peptide interactions with the Grb7-SH2 domain prepared with a GST-tag for tethering to the chip surface. This has been successfully and reliably used for direct comparison of a range of peptides under different solution conditions as well as direct comparison of peptides flowed over different related SH2 domains in real time. We have used the BIAcore system and describe both the methodology for data collection and analysis, with principles also applicable to other biosensor platforms.

摘要

生物传感器测量使用表面等离子体共振能够精确评估肽-蛋白质相互作用。这是一种灵敏的技术,提供动力学和亲和力数据,只需很少的样本,而不需要分析物标记。在这里,我们描述了它在分析与 Grb7-SH2 结构域相互作用的肽的应用,该结构域带有 GST 标签用于固定在芯片表面上。这种方法已成功可靠地用于在不同溶液条件下直接比较一系列肽,以及实时直接比较流过不同相关 SH2 结构域的肽。我们使用了 BIAcore 系统,并描述了数据收集和分析的方法,其原理也适用于其他生物传感器平台。

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Methods Mol Biol. 2023;2705:199-210. doi: 10.1007/978-1-0716-3393-9_10.
2
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本文引用的文献

1
The characterization of protein interactions - what, how and how much?蛋白质相互作用的特征化——是什么、如何以及多少?
Chem Soc Rev. 2021 Nov 15;50(22):12292-12307. doi: 10.1039/d1cs00548k.
2
Discovery, Development, and Cellular Delivery of Potent and Selective Bicyclic Peptide Inhibitors of Grb7 Cancer Target.Grb7癌症靶点强效选择性双环肽抑制剂的发现、开发及细胞递送
J Med Chem. 2017 Nov 22;60(22):9349-9359. doi: 10.1021/acs.jmedchem.7b01320. Epub 2017 Nov 10.
3
Cyclic Peptides Incorporating Phosphotyrosine Mimetics as Potent and Specific Inhibitors of the Grb7 Breast Cancer Target.
含有磷酸酪氨酸模拟物的环肽作为Grb7乳腺癌靶点的强效特异性抑制剂
J Med Chem. 2015 Oct 8;58(19):7707-18. doi: 10.1021/acs.jmedchem.5b00609. Epub 2015 Sep 23.
4
Interaction of the non-phosphorylated peptide G7-18NATE with Grb7-SH2 domain requires phosphate for enhanced affinity and specificity.非磷酸化肽 G7-18NATE 与 Grb7-SH2 结构域的相互作用需要磷酸基团来增强亲和力和特异性。
J Mol Recognit. 2012 Jan;25(1):57-67. doi: 10.1002/jmr.2148.
5
A guide to simple and informative binding assays.简单而信息丰富的结合分析测定法指南。
Mol Biol Cell. 2010 Dec;21(23):4061-7. doi: 10.1091/mbc.E10-08-0683.
6
Grb7 SH2 domain structure and interactions with a cyclic peptide inhibitor of cancer cell migration and proliferation.Grb7的SH2结构域及其与癌细胞迁移和增殖环肽抑制剂的相互作用。
BMC Struct Biol. 2007 Sep 25;7:58. doi: 10.1186/1472-6807-7-58.
7
Higher-throughput, label-free, real-time molecular interaction analysis.高通量、无标记、实时分子相互作用分析
Anal Biochem. 2007 Feb 1;361(1):1-6. doi: 10.1016/j.ab.2006.10.040. Epub 2006 Nov 13.
8
Identification of novel non-phosphorylated ligands, which bind selectively to the SH2 domain of Grb7.鉴定能选择性结合Grb7的SH2结构域的新型非磷酸化配体。
J Biol Chem. 2002 Apr 5;277(14):11918-26. doi: 10.1074/jbc.M111816200. Epub 2002 Jan 24.