用于表征枣和酸枣果实生物碱代谢的代谢组学和转录组学分析。

Metabolomics and transcriptomics analyses for characterizing the alkaloid metabolism of Chinese jujube and sour jujube fruits.

作者信息

Xue Xiaofang, Zhao Ailing, Wang Yongkang, Ren Haiyan, Su Wanlong, Li Yi, Shi Meijuan, Liu Li, Li Dengke

机构信息

Pomology Institute, Shanxi Agricultural University, Shanxi Key Laboratory of Germplasm Improvement and Utilization in Pomology, Taiyuan, China.

出版信息

Front Plant Sci. 2023 Sep 18;14:1267758. doi: 10.3389/fpls.2023.1267758. eCollection 2023.

Abstract

INTRODUCTION

Jujube is an important economic forest tree whose fruit is rich in alkaloids. Chinese jujube ( Mill.) and sour jujube ( Hu.) are the two most important species of the jujube genus. However, the mechanisms underlying the synthesis and metabolism of alkaloids in jujube fruits remain poorly understood.

METHODS

In this study, the fruits of 'Hupingzao' and 'Taigusuanzao' in different harvest stages were used as test materials, we first integrated widely targeted metabolomics and transcriptomics analyses to elucidate the metabolism of alkaloids of jujube fruits.

RESULTS

In the metabolomics analysis, 44 alkaloid metabolites were identified in 4 samples, 3 of which were unique to sour jujube fruit. The differential alkaloid metabolites (DAMs) were more accumulated in sour jujube than in Chinese jujube; further, they were more accumulated in the white ripening stage than in the red stage. DAMs were annotated to 12 metabolic pathways. Additionally, transcriptomics data revealed 259 differentially expressed genes (DEGs) involved in alkaloid synthesis and metabolism. By mapping the regulatory networks of DAMs and DEGs, we screened out important metabolites and 11 candidate genes.

DISCUSSION

This study preliminarily elucidated the molecular mechanism of jujube alkaloid synthesis. The candidate genes regulated the synthesis of key alkaloid metabolites, but the specific regulation mechanism is unclear. Taken together, our results provide insights into the metabolic networks of alkaloid synthesis in Chinese jujube and sour jujube fruits at different harvest stages, thereby providing a theoretical reference for further research on the regulatory mechanism of jujube alkaloids and their development and utilization.

摘要

引言

枣树是一种重要的经济林木,其果实富含生物碱。枣(Mill.)和酸枣(Hu.)是枣属中两个最重要的物种。然而,枣果实中生物碱合成与代谢的机制仍知之甚少。

方法

本研究以不同采收阶段的‘壶瓶枣’和‘太谷酸栆’果实为试验材料,首先整合广泛靶向代谢组学和转录组学分析,以阐明枣果实生物碱的代谢情况。

结果

在代谢组学分析中,在4个样品中鉴定出44种生物碱代谢物,其中3种是酸枣果实特有的。差异生物碱代谢物(DAMs)在酸枣中的积累量高于枣;此外,它们在白熟期的积累量高于红熟期。DAMs被注释到12条代谢途径。此外,转录组学数据揭示了259个参与生物碱合成和代谢的差异表达基因(DEGs)。通过绘制DAMs和DEGs的调控网络,我们筛选出了重要代谢物和11个候选基因。

讨论

本研究初步阐明了枣生物碱合成的分子机制。候选基因调控关键生物碱代谢物的合成,但其具体调控机制尚不清楚。综上所述,我们的研究结果为不同采收阶段枣和酸枣果实生物碱合成的代谢网络提供了见解,从而为进一步研究枣生物碱的调控机制及其开发利用提供了理论参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e2ee/10544937/c1ede42b2a4b/fpls-14-1267758-g001.jpg

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