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北高加索地区乳腺癌和卵巢癌患者中特定种族的 BRCA1、BRCA2、PALB2 和 ATM 致病性等位基因。

Ethnicity-specific BRCA1, BRCA2, PALB2, and ATM pathogenic alleles in breast and ovarian cancer patients from the North Caucasus.

机构信息

Department of Tumor Growth Biology, N.N. Petrov Institute of Oncology, Leningradskaya, 68, Pesochny-2, St. Petersburg, Russia, 197758.

St. Petersburg Pediatric Medical University, St. Petersburg, Russia.

出版信息

Breast Cancer Res Treat. 2024 Jan;203(2):307-315. doi: 10.1007/s10549-023-07135-3. Epub 2023 Oct 18.

Abstract

BACKGROUND

Mountain areas of the North Caucasus host several large ethnic communities that have preserved their national identity over the centuries.

METHODS

This study involved high-grade serous ovarian cancer (HGSOC) and breast cancer (BC) patients from Dagestan (HGSOC: 37; BC: 198), Kabardino-Balkaria (HGSOC: 68; BC: 155), North Ossetia (HGSOC: 51; BC: 104), Chechnya (HGSOC: 68; BC: 79), Ingushetia (HGSOC: 19; BC: 103), Karachay-Cherkessia (HGSOC: 13; BC: 47), and several Armenian settlements (HGSOC: 16; BC: 101). The group of BC patients was enriched by young-onset and/or family history-positive and/or bilateral and/or receptor triple-negative cases. The entire coding region of BRCA1, BRCA2, PALB2, and ATM genes was analyzed by next-generation sequencing.

RESULTS

A significant contribution of BRCA1/2 pathogenic variants (PVs) to HGSOC and BC development was observed across all North Caucasus regions (HGSOC: 19-39%; BC: 6-13%). Founder alleles were identified in all ethnic groups studied, e.g., BRCA1 c.3629_3630delAG in Chechens, BRCA2 c.6341delC in North Ossetians, BRCA2 c.5351dupA in Ingush, and BRCA1 c.2907_2910delTAAA in Karachays. Some BRCA1/2 alleles, particularly BRCA2 c.9895C > T, were shared by several nationalities. ATM PVs were detected in 14 patients, with c.1673delG and c.8876_8879delACTG alleles occurring twice each. PALB2 heterozygosity was observed in 5 subjects, with one variant seen in 2 unrelated women.

CONCLUSION

This study adds to the evidence for the global-wide contribution of BRCA1/2 genes to HGSOC and BC morbidity, although the spectrum of their PVs is a subject of ethnicity-specific variations. The data on founder BRCA1/2 alleles may be considered when adjusting the BRCA1/2 testing procedure to the ethnic origin of patients.

摘要

背景

北高加索山区有几个大型的民族社区,几个世纪以来一直保持着自己的民族身份。

方法

本研究涉及来自达吉斯坦(HGSOC:37;BC:198)、卡巴尔达-巴尔卡尔(HGSOC:68;BC:155)、北奥塞梯(HGSOC:51;BC:104)、车臣(HGSOC:68;BC:79)、印古什(HGSOC:19;BC:103)、卡拉恰伊-切尔克斯(HGSOC:13;BC:47)和几个亚美尼亚定居点(HGSOC:16;BC:101)的高级别浆液性卵巢癌(HGSOC)和乳腺癌(BC)患者。BC 患者组通过年轻发病和/或家族史阳性和/或双侧和/或受体三阴性病例进行了富集。通过下一代测序分析了 BRCA1、BRCA2、PALB2 和 ATM 基因的整个编码区。

结果

在北高加索所有地区均观察到 BRCA1/2 致病性变异(PVs)对 HGSOC 和 BC 发展的显著贡献(HGSOC:19-39%;BC:6-13%)。在所有研究的民族群体中均发现了种系 BRCA1/2 等位基因,例如,在车臣人中发现了 BRCA1 c.3629_3630delAG,在北奥塞梯人中发现了 BRCA2 c.6341delC,在印古什人中发现了 BRCA2 c.5351dupA,在卡拉恰伊-切尔克斯人中发现了 BRCA1 c.2907_2910delTAAA。一些 BRCA1/2 等位基因,特别是 BRCA2 c.9895C > T,在几个民族中共享。在 14 名患者中检测到 ATM PV,其中 c.1673delG 和 c.8876_8879delACTG 等位基因各出现两次。PALB2 杂合性在 5 名受试者中观察到,其中在 2 名无关联的女性中观察到一种变体。

结论

本研究进一步证实 BRCA1/2 基因对 HGSOC 和 BC 发病率的全球贡献,尽管其 PV 谱是种族特异性变异的一个主题。在调整 BRCA1/2 检测程序以适应患者的种族起源时,可以考虑种系 BRCA1/2 等位基因的这些数据。

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