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组学和元组学在油橄榄研究中日益重要的作用。

The Rising Role of Omics and Meta-Omics in Table Olive Research.

作者信息

Tsoungos Anastasios, Pemaj Violeta, Slavko Aleksandra, Kapolos John, Papadelli Marina, Papadimitriou Konstantinos

机构信息

Department of Food Science and Technology, University of the Peloponnese, 24100 Kalamata, Greece.

Laboratory of Food Quality Control and Hygiene, Department of Food Science and Human Nutrition, Agricultural University of Athens, Iera Odos 75, 11855 Athens, Greece.

出版信息

Foods. 2023 Oct 15;12(20):3783. doi: 10.3390/foods12203783.


DOI:10.3390/foods12203783
PMID:37893676
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10606081/
Abstract

Table olives are often the result of fermentation, a process where microorganisms transform raw materials into the final product. The microbial community can significantly impact the organoleptic characteristics and safety of table olives, and it is influenced by various factors, including the processing methods. Traditional culture-dependent techniques capture only a fraction of table olives' intricate microbiota, prompting a shift toward culture-independent methods to address this knowledge gap. This review explores recent advances in table olive research through omics and meta-omics approaches. Genomic analysis of microorganisms isolated from table olives has revealed multiple genes linked to technological and probiotic attributes. An increasing number of studies concern metagenomics and metabolomics analyses of table olives. The former offers comprehensive insights into microbial diversity and function, while the latter identifies aroma and flavor determinants. Although proteomics and transcriptomics studies remain limited in the field, they have the potential to reveal deeper layers of table olives' microbiome composition and functionality. Despite the challenges associated with implementing multi-omics approaches, such as the reliance on advanced bioinformatics tools and computational resources, they hold the promise of groundbreaking advances in table olive processing technology.

摘要

油浸橄榄通常是发酵的产物,在这个过程中微生物将原材料转化为最终产品。微生物群落会显著影响油浸橄榄的感官特性和安全性,并且它受到多种因素的影响,包括加工方法。传统的依赖培养的技术只能捕获油浸橄榄复杂微生物群的一小部分,这促使人们转向不依赖培养的方法来弥补这一知识空白。本综述通过组学和宏组学方法探索了油浸橄榄研究的最新进展。从油浸橄榄中分离出的微生物的基因组分析揭示了多个与技术和益生菌特性相关的基因。越来越多的研究关注油浸橄榄的宏基因组学和代谢组学分析。前者提供了对微生物多样性和功能的全面见解,而后者则确定了香气和风味的决定因素。尽管蛋白质组学和转录组学研究在该领域仍然有限,但它们有潜力揭示油浸橄榄微生物群落组成和功能的更深层次。尽管实施多组学方法存在挑战,例如依赖先进的生物信息学工具和计算资源,但它们有望在油浸橄榄加工技术方面取得突破性进展。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d28/10606081/c87f10993563/foods-12-03783-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d28/10606081/3c0245d9fe65/foods-12-03783-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d28/10606081/c87f10993563/foods-12-03783-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d28/10606081/3c0245d9fe65/foods-12-03783-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d28/10606081/c87f10993563/foods-12-03783-g002.jpg

相似文献

[1]
The Rising Role of Omics and Meta-Omics in Table Olive Research.

Foods. 2023-10-15

[2]
Current Status, Recent Advances, and Main Challenges on Table Olive Fermentation: The Present Meets the Future.

Front Microbiol. 2022-1-13

[3]
FoodOmics as a new frontier to reveal microbial community and metabolic processes occurring on table olives fermentation.

Food Microbiol. 2020-12

[4]
Olive Fruit Development and Ripening: Break on through to the "-Omics" Side.

Int J Mol Sci. 2021-5-28

[5]
Table Olive Fermentation Using Starter Cultures with Multifunctional Potential.

Microorganisms. 2017-5-28

[6]
Main Challenges Expected from the Impact of Climate Change on Microbial Biodiversity of Table Olives: Current Status and Trends.

Foods. 2023-10-9

[7]
Microbial community and volatilome changes in brines along the spontaneous fermentation of Spanish-style and natural-style green table olives (Manzanilla cultivar).

Food Microbiol. 2023-8

[8]
Volatile Composition of Industrially Fermented Table Olives from Greece.

Foods. 2021-5-2

[9]
Microbial Diversity of Fermented Greek Table Olives of Halkidiki and Konservolia Varieties from Different Regions as Revealed by Metagenomic Analysis.

Microorganisms. 2020-8-14

[10]
Technologies and Trends to Improve Table Olive Quality and Safety.

Front Microbiol. 2018-4-4

本文引用的文献

[1]
Microbial and Chemical Characterization of Natural-Style Green Table Olives from the Gordal, Hojiblanca and Manzanilla Cultivars.

Foods. 2023-6-15

[2]
Exploring yeast diversity of dry-salted naturally black olives from Greek retail outlets with culture dependent and independent molecular methods.

Int J Food Microbiol. 2023-8-2

[3]
Microbial community and volatilome changes in brines along the spontaneous fermentation of Spanish-style and natural-style green table olives (Manzanilla cultivar).

Food Microbiol. 2023-8

[4]
In Silico Evidence of the Multifunctional Features of LPG1, a Natural Fermenting Agent Isolated from Table Olive Biofilms.

Foods. 2023-2-22

[5]
Fermented table olives from Cyprus: Microbiota profile of three varieties from different regions through metabarcoding sequencing.

Front Microbiol. 2023-1-17

[6]
Advances in fermented foods revealed by multi-omics: A new direction toward precisely clarifying the roles of microorganisms.

Front Microbiol. 2022-12-14

[7]
genomic analysis of the potential probiotic CF2-10N reveals promising beneficial effects with health promoting properties.

Front Microbiol. 2022-11-3

[8]
Changes in resistome profile of potential probiotic Lactiplantibacillus pentosus in response to edible oil adaptation.

Food Microbiol. 2023-2

[9]
Metatranscriptomic and metataxonomic insights into the ultra-small microbiome of the Korean fermented vegetable, kimchi.

Front Microbiol. 2022-10-5

[10]
Exploring microbial communities of Spanish-style green table olives of Conservolea and Halkidiki cultivars during modified atmosphere packaging in multi-layered pouches through culture-dependent techniques and metataxonomic analysis.

Food Microbiol. 2022-10

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