Chemo and Bioinformatics Lab, Bio Search Research Institution BSRI, Giza 12613, Egypt.
Department of Chemistry and Biochemistry, Faculty of Science, Damietta University, Damietta 7952567, Egypt.
Curr Pharm Des. 2023;29(34):2752-2762. doi: 10.2174/0113816128260449231017091824.
In the case of COVID-19 patients, it has been observed that the immune system of the infected person exhibits an extreme inflammatory response known as cytokine release syndrome (CRS) where the inflammatory cytokines are swiftly produced in quite large amounts in response to infective stimuli. Numerous case studies of COVID-19 patients with severe symptoms have documented the presence of higher plasma concentrations of human interleukin-6 (IL-6), which suggests that IL-6 is a crucial factor in the pathophysiology of the disease. In order to prevent CRS in COVID-19 patients, the drugs that can exhibit binding interactions with IL-6 and block the signaling pathways to decrease the IL-6 activity may be repurposed.
This research work focused on molecular docking-based screening of the drugs celecoxib (CXB) and dexamethasone (DME) to explore their potential to interact with the binding sites of IL-6 protein and reduce the hyper-activation of IL-6 in the infected personnel.
Both of the drugs were observed to bind with the IL-6 (IL-6 receptor alpha chain) and IL-6Rα receptor with the respective affinities of -7.3 kcal/mol and -6.3 kcal/mol, respectively, for CXB and DME. Moreover, various types of binding interactions of the drugs with the target proteins were also observed in the docking studies. The dynamic behaviors of IL-6/IL-6Rα in complex with the drugs were also explored through molecular dynamics simulation analysis. The results indicated significant stabilities of the acquired drug-protein complexes up to 100 ns.
The findings of this study have suggested the potential of the drugs studied to be utilized as antagonists for countering CRS in COVID-19 ailment. This study presents the studied drugs as promising candidates both for the clinical and pre-clinical treatment of COVID-19.
在 COVID-19 患者中,观察到感染者的免疫系统表现出一种称为细胞因子释放综合征(CRS)的极端炎症反应,其中炎症细胞因子迅速以相当大的量产生以响应感染性刺激。大量有严重症状的 COVID-19 患者的病例研究记录了更高的人白细胞介素-6(IL-6)血浆浓度,这表明 IL-6 是疾病病理生理学中的关键因素。为了预防 COVID-19 患者的 CRS,可以重新利用能够与 IL-6 表现出结合相互作用并阻断信号通路以降低 IL-6 活性的药物。
这项研究工作专注于基于分子对接的筛选药物塞来昔布(CXB)和地塞米松(DME),以探索它们与 IL-6 蛋白结合位点相互作用并降低感染人员中 IL-6 过度激活的潜力。
观察到两种药物都与 IL-6(IL-6 受体 alpha 链)和 IL-6Rα 受体结合,CXB 和 DME 的亲和力分别为-7.3 kcal/mol 和-6.3 kcal/mol。此外,还在对接研究中观察到药物与靶蛋白的各种类型的结合相互作用。还通过分子动力学模拟分析研究了 IL-6/IL-6Rα 与药物复合物的动态行为。结果表明,获得的药物-蛋白复合物在长达 100 ns 的时间内具有显著的稳定性。
这项研究的结果表明,所研究的药物具有作为 COVID-19 疾病 CRS 拮抗剂的潜力。这项研究将所研究的药物作为治疗 COVID-19 的临床和临床前候选药物。