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多细胞生长作为一个动态的细胞网络。

Multicellular growth as a dynamic network of cells.

作者信息

Nanda Piyush, Barrere Julien, LaBar Thomas, Murray Andrew W

机构信息

Program in Biological and Biomedical Sciences, Harvard Medical School, Boston, MA 02115, USA.

Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA.

出版信息

bioRxiv. 2023 Nov 3:2023.11.02.565242. doi: 10.1101/2023.11.02.565242.

Abstract

Cell division without cell separation produces multicellular clusters in budding yeast. Two fundamental characteristics of these clusters are their size (the number of cells per cluster) and cellular composition: the fractions of cells with different phenotypes. However, we do not understand how different cellular features quantitatively influence these two phenotypes. Using cells as nodes and links between mother and daughter cells as edges, we model cluster growth and breakage by varying three parameters: the cell division rate, the rate at which intercellular connections break, and the kissing number (the maximum number of connections to one cell). We find that the kissing number sets the maximum possible cluster size. Below this limit, the ratio of the cell division rate to the connection breaking rate determines the cluster size. If links have a constant probability of breaking per unit time, the probability that a link survives decreases exponentially with its age. Modeling this behavior recapitulates experimental data. We then use this framework to examine synthetic, differentiating clusters with two cell types, faster-growing germ cells and their somatic derivatives. The fraction of clusters that contain both cell types increases as either of two parameters increase: the kissing number and difference between the growth rate of germ and somatic cells. In a population of clusters, the variation in cellular composition is inversely correlated (r=0.87) with the average fraction of somatic cells in clusters. Our results show how a small number of cellular features can control the phenotypes of multicellular clusters that were potentially the ancestors of more complex forms of multicellular development, organization, and reproduction.

摘要

在出芽酵母中,细胞分裂但不发生细胞分离会产生多细胞簇。这些簇的两个基本特征是它们的大小(每个簇中的细胞数量)和细胞组成:具有不同表型的细胞比例。然而,我们并不清楚不同的细胞特征如何定量地影响这两种表型。我们将细胞作为节点,将母细胞与子细胞之间的连接作为边,通过改变三个参数来模拟簇的生长和破裂:细胞分裂速率、细胞间连接断裂的速率以及亲和数(一个细胞的最大连接数)。我们发现亲和数设定了最大可能的簇大小。在这个极限以下,细胞分裂速率与连接断裂速率的比值决定了簇的大小。如果连接在单位时间内有恒定的断裂概率,那么一个连接存活的概率会随着其存在时间呈指数下降。对这种行为进行建模可重现实验数据。然后,我们使用这个框架来研究具有两种细胞类型的合成、分化簇:生长较快的生殖细胞及其体细胞衍生物。包含两种细胞类型的簇的比例会随着两个参数之一的增加而增加:亲和数以及生殖细胞和体细胞生长速率之间的差异。在一群簇中,细胞组成的变化与簇中体细胞的平均比例呈负相关(r = 0.87)。我们的结果表明,少数细胞特征如何能够控制多细胞簇的表型,而这些多细胞簇可能是更复杂形式的多细胞发育、组织和繁殖的祖先。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0e68/10635083/4c9731699174/nihpp-2023.11.02.565242v1-f0001.jpg

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