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遗传学、基因组学与进化。

Genetics, Genomics, and Evolution.

机构信息

Institute of Evolution and Marine Biodiversity, KLMME, Ocean University of China, Qingdao, Shandong Province, China; email:

Laboratory for Marine Biology and Biotechnology, Laoshan Laboratory, Qingdao, Shandong Province, China.

出版信息

Annu Rev Genet. 2023 Nov 27;57:391-410. doi: 10.1146/annurev-genet-071819-104035.

Abstract

The ciliate genus served as one of the first model systems in microbial eukaryotic genetics, contributing much to the early understanding of phenomena as diverse as genome rearrangement, cryptic speciation, cytoplasmic inheritance, and endosymbiosis, as well as more recently to the evolution of mating types, introns, and roles of small RNAs in DNA processing. Substantial progress has recently been made in the area of comparative and population genomics. species combine some of the lowest known mutation rates with some of the largest known effective populations, along with likely very high recombination rates, thereby harboring a population-genetic environment that promotes an exceptionally efficient capacity for selection. As a consequence, the genomes are extraordinarily streamlined, with very small intergenic regions combined with small numbers of tiny introns. The subject of the bulk of research, the ancient species complex, is descended from two whole-genome duplication events that retain high degrees of synteny, thereby providing an exceptional platform for studying the fates of duplicate genes. Despite having a common ancestor dating to several hundred million years ago, the known descendant species are morphologically indistinguishable, raising significant questions about the common view that gene duplications lead to the origins of evolutionary novelties.

摘要

纤毛门的 属是微生物真核遗传学的首批模式系统之一,为许多现象的早期理解做出了贡献,如基因组重排、隐生种形成、细胞质遗传和内共生,以及最近在交配型、内含子和小 RNA 在 DNA 加工中的作用的进化。在比较和群体基因组学领域最近取得了实质性进展。 种具有已知的最低突变率和最大的有效种群,可能还有非常高的重组率,因此具有促进选择的高效环境。因此,基因组非常精简,基因间区非常小,内含子数量也很少。大量研究的主题是古老的 种复合体,它起源于两次全基因组复制事件,保留了高度的同线性,从而为研究重复基因的命运提供了一个极好的平台。尽管它们有一个可以追溯到数亿年前的共同祖先,但已知的后裔种在形态上无法区分,这对基因复制导致进化新奇的出现这一普遍观点提出了重大质疑。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/76fd/11334263/1b70fa3c2d0f/nihms-2015962-f0001.jpg

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