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一种通过计算机模拟从海州常山(Thunb.)中鉴定生物活性植物化学物质作为人类谷胱甘肽还原酶潜在抑制剂的方法。

An in-silico approach to identify bioactive phytochemicals from Thunb. As potential inhibitors of human glutathione reductase.

作者信息

Sangeet Satyam, Khan Arshad

机构信息

Department of Chemical Sciences, Indian Institute of Science Education and Research, Kolkata, India.

CompObelisk, Mirzapur, India.

出版信息

J Biomol Struct Dyn. 2025 Mar;43(5):2300-2319. doi: 10.1080/07391102.2023.2294181. Epub 2023 Dec 18.

Abstract

Cellular infections are central to the etiology of various diseases, notably cancer and malaria. Counteracting cellular oxidative stress the inhibition of glutathione reductase (GR) has emerged as a promising therapeutic strategy. , a medicinal plant known for its potent antioxidant properties, has been the focus of our investigation. In this study, we conducted comprehensive in silico analyses involving the phytochemical constituents of to identify potential natural GR inhibitors. Our methodological approach encompassed multiple in silico techniques, including molecular docking, molecular dynamics simulations, MMPBSA analysis, and dynamic cross-correlation analysis. Out of 13 docked phytochemicals, Quercetin, Quercitrin, and Sesamin emerged as particularly noteworthy due to their exceptional binding affinities for GR. Notably, our investigation demonstrated that Quercetin and Sesamin exhibited promising outcomes compared to the well-established pharmaceutical agent N-acetylcysteine (NAC). Molecular dynamics analyses provided insights into the ability of these phytochemicals to induce structural compaction and stabilization of the GR protein, as evidenced by changes in radius of gyration and solvent-accessible surface area. Moreover, MMPBSA analysis highlighted the crucial roles of specific residues, namely Gly27, Gly28, Ser51, His52, and Val61, in mediating essential interactions with these phytochemicals. Furthermore, an assessment of Absorption, Distribution, Metabolism, Excretion, and Toxicity (ADME-Tox) profiles underscored the favourable drug-like attributes of these phytochemicals. Thus, the current findings underscore the immense potential of phytochemicals as potent antioxidants with the capacity to combat a spectrum of maladies, including malaria and cancer. This study not only unveils novel therapeutic avenues but also underscores the distinctive outcomes and paramount significance of harnessing phytochemicals for their efficacious antioxidant properties.

摘要

细胞感染是各种疾病病因的核心,尤其是癌症和疟疾。对抗细胞氧化应激——抑制谷胱甘肽还原酶(GR)已成为一种有前景的治疗策略。[某种药用植物名称],一种以其强大抗氧化特性而闻名的药用植物,一直是我们研究的重点。在本研究中,我们对[某种药用植物名称]的植物化学成分进行了全面的计算机模拟分析,以确定潜在的天然GR抑制剂。我们的方法包括多种计算机模拟技术,如分子对接、分子动力学模拟、MMPBSA分析和动态交叉相关分析。在13种对接的植物化学成分中,槲皮素、槲皮苷和芝麻素因其与GR的特殊结合亲和力而显得尤为突出。值得注意的是,我们的研究表明,与成熟的药物N - 乙酰半胱氨酸(NAC)相比,槲皮素和芝麻素显示出有前景的结果。分子动力学分析揭示了这些植物化学成分诱导GR蛋白结构紧凑和稳定的能力,这通过回转半径和溶剂可及表面积的变化得到证明。此外,MMPBSA分析突出了特定残基,即Gly27、Gly28、Ser51、His52和Val61,在介导与这些植物化学成分的关键相互作用中的重要作用。此外,对吸收、分布、代谢、排泄和毒性(ADME - Tox)概况的评估强调了这些植物化学成分良好的类药物属性。因此,目前的研究结果强调了[某种药用植物名称]植物化学成分作为强大抗氧化剂的巨大潜力,其能够对抗包括疟疾和癌症在内的一系列疾病。这项研究不仅揭示了新的治疗途径,还强调了利用[某种药用植物名称]植物化学成分因其有效的抗氧化特性而产生的独特结果和至关重要的意义。

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