Chhettri Saroja, Sevigny Joseph, Pesce Céline, Sarkar Indrani, Thomas W Kelley, Nouioui Imen, Sen Gargi, Tisa Louis S, Sen Arnab
Department of Botany, University of North Bengal, Raja Rammohanpur, Siliguri-734013, India.
Midnapore College, Midnapore, West Bengal 721101, India.
J Genomics. 2024 Jan 1;12:6-13. doi: 10.7150/jgen.87156. eCollection 2024.
Strain San01 is isolated from the soil of ant-nest found in the tea estate of Darjeeling, India. The morphology, biochemical, as well as the molecular characteristics, proved that San01 belonged to the genus The average nucleotide identity (ANI) value between the genome sequence of the studied strain and its closest phylogenetic neighbors were very low and also could be distinguished from its closest neighbour with broad range of phenotypic data. The draft genome sequence of isolate San01 (NZ_RZYA00000000.1) was estimated to be 9.12 Mbp in size with 71.2% of GC content and it encompasses 39 biosynthetic gene clusters that emphasize the biotechnological potential of this isolateBased on the phenotypic, genetic and genomic data, isolate San01 (=JCM 34633 = NCTC 14543) merits to be recognized as a type strain of a novel species and hereby propose the name sp. nov. Incidentally, this is the first report on genomes from Darjeeling, India.
菌株San01是从印度大吉岭茶园发现的蚁巢土壤中分离出来的。其形态学、生物化学以及分子特征证明San01属于该属。所研究菌株的基因组序列与其最接近的系统发育邻居之间的平均核苷酸同一性(ANI)值非常低,并且也可以通过广泛的表型数据与其最接近的邻居区分开来。分离株San01(NZ_RZYA00000000.1)的基因组草图序列估计大小为9.12 Mbp,GC含量为71.2%,它包含39个生物合成基因簇,突出了该分离株的生物技术潜力。基于表型、遗传和基因组数据,分离株San01(=JCM 34633 = NCTC 14543)值得被认可为一个新物种的模式菌株,特此提出名称 新种。顺便提一下,这是关于来自印度大吉岭的 基因组的首次报道。