Center for Reproductive Medicine, Department of Obstetrics and Gynecology, Qilu Hospital, Shandong University, Jinan, China.
Department of Reproductive Medicine, Linyi People's Hospital, Shandong University, Linyi, China.
J Ovarian Res. 2024 Jan 6;17(1):7. doi: 10.1186/s13048-023-01338-4.
Polycystic ovary syndrome (PCOS) is an exceedingly intractable issue affecting female endocrine and reproductive health. However, the etiology and intricate pathological mechanisms of PCOS remain unclear. Nowadays, aging was found to share multiple common pathological mechanisms with PCOS, which causes probing into the pathogenesis of PCOS from senescence. However, no bioinformatics analyses have specifically focused on connection between PCOS and ovarian aging.
Differentially expressed aging-related genes in PCOS were identified and then analyzed using function enrichment method. Hub genes were determined based on multiple algorithms, and expression validation of hub genes was performed in both datasets and experiments (human granulosa-like tumor cell line, KGN; human Granulosa Cell, hGCs). Finally, a transcription factor-miRNA-gene network of hub genes was constructed.
Here, we identified 73 aging-related differential expression genes (ARDEGs) by intersecting DEGs in PCOS and senescence-related gene set. Furthermore, we performed biological functions and potential pathways of ARDEGs and potential hub genes were also screened by multiple algorithms. From the perspective of immune dysfunction, we analyzed the correlation between PCOS and immune cells. Finally, TF-miRNA-gene networks were constructed. Finally, TF-miRNA-gene networks were constructed.
Our work aimed to elucidate the relation between PCOS and cellular senescence based on bioinformatics strategy, deepening the understanding of mechanisms and to seek for novel therapy strategies for improving reproductive lifespan and female health. Exploring the potential molecular mechanism of cell aging in PCOS is expected to bring a new breakthrough for PCOS diagnosis and therapy strategies. And this, might deepen our understanding about intricate mechanisms of ovarian aging.
多囊卵巢综合征(PCOS)是一种严重影响女性内分泌和生殖健康的疾病。然而,PCOS 的病因和复杂的病理机制仍不清楚。如今,衰老被发现与 PCOS 存在多种共同的病理机制,这促使人们从衰老的角度探究 PCOS 的发病机制。然而,目前尚无专门针对 PCOS 与卵巢衰老之间关系的生物信息学分析。
通过功能富集方法鉴定 PCOS 中与衰老相关的差异表达基因(ARDEGs),然后进行分析。基于多种算法确定枢纽基因,并在两个数据集和实验(人颗粒细胞样肿瘤细胞系,KGN;人颗粒细胞,hGCs)中对枢纽基因进行表达验证。最后,构建枢纽基因的转录因子-miRNA-基因网络。
在这里,我们通过 intersecting PCOS 和衰老相关基因集中的 DEGs 鉴定了 73 个与衰老相关的差异表达基因(ARDEGs)。此外,我们还通过多种算法对 ARDEGs 的生物功能和潜在途径进行了分析,并筛选出了潜在的枢纽基因。从免疫功能障碍的角度,我们分析了 PCOS 与免疫细胞之间的相关性。最后,构建了 TF-miRNA-基因网络。
我们的工作旨在通过生物信息学策略阐明 PCOS 与细胞衰老之间的关系,深入了解其机制,并寻求改善生殖寿命和女性健康的新治疗策略。探索 PCOS 中细胞衰老的潜在分子机制有望为 PCOS 的诊断和治疗策略带来新的突破,并可能加深我们对卵巢衰老复杂机制的理解。