Fang Jing, Li Tianzuo, Lee Jiyeon, Im Dahye, Xu Lianjie, Liu Yajie, Seo Jongcheol, Zhang Wen-Bin
Beijing National Laboratory for Molecular Sciences, Key Laboratory of Polymer Chemistry & Physics of Ministry of Education, Center for Soft Matter Science and Engineering, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China.
Department of Chemistry, Pohang University of Science and Technology (POSTECH), Pohang 37673, Republic of Korea.
Natl Sci Rev. 2023 Nov 29;10(11):nwad304. doi: 10.1093/nsr/nwad304. eCollection 2023 Nov.
A single-domain protein catenane refers to two mechanically interlocked polypeptide rings that fold synergistically into a compact and integrated structure, which is extremely rare in nature. Here, we report a single-domain protein catenane of dihydrofolate reductase (-DHFR). This design was achieved by rewiring the connectivity between secondary motifs to introduce artificial entanglement and synthesis was readily accomplished through a series of programmed and streamlined post-translational processing events in cells without any additional reactions. The target molecule contained few exogenous motifs and was thoroughly characterized using a combination of ultra-performance liquid chromatography-mass spectrometry, sodium dodecyl sulfate-polyacrylamide gel electrophoresis, protease cleavage experiments and ion mobility spectrometry-mass spectrometry. Compared with the linear control, -DHFR retained its catalytic capability and exhibited enhanced stability against thermal or chemical denaturation due to conformational restriction. These results suggest that linear proteins may be converted into their concatenated single-domain counterparts with almost identical chemical compositions, well-preserved functions and elevated stabilities, representing an entirely new horizon in protein science.
单结构域蛋白质连环体是指两个机械互锁的多肽环,它们协同折叠成一个紧凑且完整的结构,这在自然界中极为罕见。在此,我们报道了一种二氢叶酸还原酶(-DHFR)的单结构域蛋白质连环体。这种设计是通过重新连接二级基序之间的连接来引入人工缠结实现的,并且通过细胞内一系列程序化和简化的翻译后加工事件很容易完成合成,无需任何额外反应。目标分子含有少量外源基序,并使用超高效液相色谱-质谱联用、十二烷基硫酸钠-聚丙烯酰胺凝胶电泳、蛋白酶切割实验和离子淌度光谱-质谱联用等方法进行了全面表征。与线性对照相比,-DHFR保留了其催化能力,并且由于构象限制,对热或化学变性表现出更高的稳定性。这些结果表明,线性蛋白质可以转化为几乎具有相同化学组成、功能保存良好且稳定性提高的串联单结构域对应物,这代表了蛋白质科学的一个全新领域。