Papadimitriou Elsa, Thomaidou Dimitra
Department of Neurobiology, Hellenic Pasteur Institute, Athens, Greece.
Neural Regen Res. 2024 Sep 1;19(9):1929-1939. doi: 10.4103/1673-5374.390976. Epub 2023 Dec 15.
Neurogenesis is a tightly regulated process in time and space both in the developing embryo and in adult neurogenic niches. A drastic change in the transcriptome and proteome of radial glial cells or neural stem cells towards the neuronal state is achieved due to sophisticated mechanisms of epigenetic, transcriptional, and post-transcriptional regulation. Understanding these neurogenic mechanisms is of major importance, not only for shedding light on very complex and crucial developmental processes, but also for the identification of putative reprogramming factors, that harbor hierarchically central regulatory roles in the course of neurogenesis and bare thus the capacity to drive direct reprogramming towards the neuronal fate. The major transcriptional programs that orchestrate the neurogenic process have been the focus of research for many years and key neurogenic transcription factors, as well as repressor complexes, have been identified and employed in direct reprogramming protocols to convert non-neuronal cells, into functional neurons. The post-transcriptional regulation of gene expression during nervous system development has emerged as another important and intricate regulatory layer, strongly contributing to the complexity of the mechanisms controlling neurogenesis and neuronal function. In particular, recent advances are highlighting the importance of specific RNA binding proteins that control major steps of mRNA life cycle during neurogenesis, such as alternative splicing, polyadenylation, stability, and translation. Apart from the RNA binding proteins, microRNAs, a class of small non-coding RNAs that block the translation of their target mRNAs, have also been shown to play crucial roles in all the stages of the neurogenic process, from neural stem/progenitor cell proliferation, neuronal differentiation and migration, to functional maturation. Here, we provide an overview of the most prominent post-transcriptional mechanisms mediated by RNA binding proteins and microRNAs during the neurogenic process, giving particular emphasis on the interplay of specific RNA binding proteins with neurogenic microRNAs. Taking under consideration that the molecular mechanisms of neurogenesis exert high similarity to the ones driving direct neuronal reprogramming, we also discuss the current advances in in vitro and in vivo direct neuronal reprogramming approaches that have employed microRNAs or RNA binding proteins as reprogramming factors, highlighting the so far known mechanisms of their reprogramming action.
神经发生在发育中的胚胎和成体神经发生微环境中都是一个在时间和空间上受到严格调控的过程。由于表观遗传、转录和转录后调控的复杂机制,放射状胶质细胞或神经干细胞的转录组和蛋白质组会朝着神经元状态发生剧烈变化。了解这些神经发生机制至关重要,这不仅有助于揭示非常复杂且关键的发育过程,还能用于鉴定假定的重编程因子,这些因子在神经发生过程中具有层次化的核心调控作用,因而具备驱动直接重编程为神经元命运的能力。多年来,协调神经发生过程的主要转录程序一直是研究的重点,关键的神经发生转录因子以及阻遏复合物已被鉴定出来,并应用于直接重编程方案中,以将非神经元细胞转化为功能性神经元。神经系统发育过程中基因表达的转录后调控已成为另一个重要且复杂的调控层面,极大地增加了控制神经发生和神经元功能机制的复杂性。特别是,最近的进展凸显了特定RNA结合蛋白的重要性,这些蛋白在神经发生过程中控制mRNA生命周期的主要步骤,如可变剪接、聚腺苷酸化、稳定性和翻译。除了RNA结合蛋白,微小RNA(一类通过阻断其靶mRNA的翻译发挥作用的小非编码RNA)也已被证明在神经发生过程的所有阶段都发挥着关键作用,从神经干/祖细胞增殖、神经元分化和迁移到功能成熟。在这里,我们概述了在神经发生过程中由RNA结合蛋白和微小RNA介导的最突出的转录后机制,特别强调特定RNA结合蛋白与神经发生微小RNA之间的相互作用。鉴于神经发生的分子机制与驱动直接神经元重编程的机制高度相似,我们还讨论了体外和体内直接神经元重编程方法的当前进展,这些方法采用微小RNA或RNA结合蛋白作为重编程因子,突出了它们重编程作用的已知机制。