文献检索文档翻译深度研究
Suppr Zotero 插件Zotero 插件
邀请有礼套餐&价格历史记录

新学期,新优惠

限时优惠:9月1日-9月22日

30天高级会员仅需29元

1天体验卡首发特惠仅需5.99元

了解详情
不再提醒
插件&应用
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
高级版
套餐订阅购买积分包
AI 工具
文献检索文档翻译深度研究
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2025

对家族 GH119 的生化研究揭示了其具有单一的α-淀粉酶特异性,并证实了与 GH57 酶共享催化机制。

Biochemical exploration of family GH119 reveals a single α-amylase specificity and confirms shared catalytic machinery with GH57 enzymes.

机构信息

Department of Biotechnology and Biomedicine, Technical University of Denmark, Søltofts Plads, Kongens Lyngby 2800, Denmark.

Department of Biotechnology and Biomedicine, Technical University of Denmark, Søltofts Plads, Kongens Lyngby 2800, Denmark; Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah 21589, Saudi Arabia.

出版信息

Int J Biol Macromol. 2024 Mar;262(Pt 2):129783. doi: 10.1016/j.ijbiomac.2024.129783. Epub 2024 Jan 26.


DOI:10.1016/j.ijbiomac.2024.129783
PMID:38280706
Abstract

While hundreds of starch- and glycogen-degrading enzymes have been characterized experimentally in historical families such as GH13, GH14, GH15, GH57 and GH126 of the CAZy database (www.cazy.org), the α-amylase from Bacillus circulans is the only enzyme that has been characterized in family GH119. Since glycosidase families have been shown to often group enzymes with different substrates or products, a single characterized enzyme in a family is insufficient to extrapolate enzyme function based solely on sequence similarity. Here we report the rational exploration of family GH119 through the biochemical characterization of five GH119 members. All enzymes shared single α-amylase specificity but display distinct product profile. We also report the first kinetic constants in family GH119 and the first experimental validation of previously predicted catalytic residues in family GH119, confirming that families GH119 and GH57 can be grouped in the novel clan GH-T of the CAZy database.

摘要

虽然 CAZy 数据库(www.cazy.org)中已经在历史悠久的家族(如 GH13、GH14、GH15、GH57 和 GH126)中对数百种淀粉和糖原降解酶进行了实验表征,但仅有来源于环状芽孢杆菌的α-淀粉酶在 GH119 家族中进行了表征。由于糖苷酶家族通常将具有不同底物或产物的酶聚集在一起,因此仅对家族中的单个特征酶进行研究,不足以仅根据序列相似性推断酶的功能。在这里,我们通过对五个 GH119 成员的生化特性进行研究,对 GH119 家族进行了合理的探索。所有酶均具有单一的α-淀粉酶特异性,但表现出不同的产物谱。我们还报道了 GH119 家族的第一个动力学常数,并首次对 GH119 家族中先前预测的催化残基进行了实验验证,证实了 GH119 家族和 GH57 家族可以归入 CAZy 数据库中新型 GH-T 家族。

相似文献

[1]
Biochemical exploration of family GH119 reveals a single α-amylase specificity and confirms shared catalytic machinery with GH57 enzymes.

Int J Biol Macromol. 2024-3

[2]
α-Amylase: an enzyme specificity found in various families of glycoside hydrolases.

Cell Mol Life Sci. 2013-6-27

[3]
In silico identification of catalytic residues and domain fold of the family GH119 sharing the catalytic machinery with the α-amylase family GH57.

FEBS Lett. 2012-7-17

[4]
In silico analysis of the α-amylase family GH57: eventual subfamilies reflecting enzyme specificities.

3 Biotech. 2018-7

[5]
Remarkable evolutionary relatedness among the enzymes and proteins from the α-amylase family.

Cell Mol Life Sci. 2016-7

[6]
Characterization of Two Glycoside Hydrolases of Family GH13 and GH57, Present in a Polysaccharide Utilization Locus (PUL) of sp. SGAir0037.

Molecules. 2024-6-12

[7]
Tracing the evolution of the α-amylase subfamily GH13_36 covering the amylolytic enzymes intermediate between oligo-1,6-glucosidases and neopullulanases.

Carbohydr Res. 2012-12-3

[8]
Introduction of novel thermostable α-amylases from genus Anoxybacillus and proposing to group the Bacillaceae related α-amylases under five individual GH13 subfamilies.

World J Microbiol Biotechnol. 2018-6-15

[9]
Sequence-structural features and evolutionary relationships of family GH57 α-amylases and their putative α-amylase-like homologues.

Protein J. 2011-8

[10]
Two potentially novel amylolytic enzyme specificities in the prokaryotic glycoside hydrolase α-amylase family GH57.

Microbiology (Reading). 2013-10-9

引用本文的文献

[1]
Myxobacteria: Versatile cell factories of novel commercial enzymes for bio-manufacturing.

Biotechnol Adv. 2025-9

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

推荐工具

医学文档翻译智能文献检索