盐碱胁迫促进浅菱形藻油脂积累的差异蛋白质分析

Differential protein analysis of saline-alkali promoting the oil accumulation in Nitzschia palea.

作者信息

Wang Xintong, Meng Xianghong, Dong Yanlong, Song Chunhua, Sui Fengyang, Lu Xinxin, Mei Xiaoxue, Fan Yawen, Liu Yan

机构信息

College of Life Sciences and Technology, Harbin Normal University, Harbin, China.

Key Laboratory of Biodiversity of Aquatic Organisms, Harbin Normal University, Harbin, China.

出版信息

Biotechnol Biofuels Bioprod. 2024 Jan 28;17(1):11. doi: 10.1186/s13068-023-02451-8.

Abstract

BACKGROUND

The increasingly severe salinization of the aquatic environment has led to serious damage to the habitats of aquatic organisms. Benthic diatoms are commonly employed as indicator species for assessing water quality and serve as a reflection of the overall health of the aquatic ecosystem. Nitzschia palea is a common diatom found in freshwater, with high oil content, rapid reproductive rate, and it is a commonly dominant species in various rivers.

RESULTS

The results showed that after 4 days (d) of saline-alkali stress, the cell density and chlorophyll a content of Nitzschia palea reached their maximum values. Therefore, we selected Nitzschia palea under 4 d stress for Tandem Mass Tag (TMT) quantitative proteomic analysis to explore the molecular adaptation mechanism of freshwater diatoms under saline-alkali stress. Totally, 854 proteins were enriched, of which 439 differentially expressed proteins were identified. Gene ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and subcellular fractionation analysis revealed that these proteins were mainly enriched in the photosynthesis pathway, citric acid cycle (TCA cycle), fatty acid synthesis, and glutathione cycle.

CONCLUSIONS

This study aims to reveal the physiological, biochemical and proteomic mechanisms of salt and alkali tolerance and molecular adaptation of Nitzschia palea under different saline-alkali concentrations. This study showed that Nitzschia palea is one candidate of the environmental friendly, renewable bioenergy microalgae. Meantime, Nitzschia palea reveals for the proteome of the freshwater and provides the basis, it became a model algal species for freshwater diatoms.

摘要

背景

水生环境盐渍化日益严重,已对水生生物栖息地造成严重破坏。底栖硅藻通常被用作评估水质的指示物种,反映水生生态系统的整体健康状况。纤细菱形藻是淡水中常见的硅藻,含油量高,繁殖速度快,是各河流中常见的优势物种。

结果

结果表明,在盐碱胁迫4天后,纤细菱形藻的细胞密度和叶绿素a含量达到最大值。因此,我们选择4天胁迫下的纤细菱形藻进行串联质谱标签(TMT)定量蛋白质组分析,以探究淡水硅藻在盐碱胁迫下的分子适应机制。共富集到854种蛋白质,其中鉴定出439种差异表达蛋白质。基因本体论(GO)、京都基因与基因组百科全书(KEGG)以及亚细胞分级分析表明,这些蛋白质主要富集在光合作用途径、柠檬酸循环(TCA循环)、脂肪酸合成和谷胱甘肽循环中。

结论

本研究旨在揭示纤细菱形藻在不同盐碱浓度下耐盐碱及分子适应的生理、生化和蛋白质组学机制。本研究表明,纤细菱形藻是环境友好型可再生生物能源微藻的候选物种之一。同时,纤细菱形藻为淡水蛋白质组学研究提供了依据,成为淡水硅藻的模式藻种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5a95/10823674/56455d3cb7d9/13068_2023_2451_Fig1_HTML.jpg

相似文献

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索