Kim Eun-Jeong, Jeon Donggu, Park Yeon-Jeong, Woo Hyunmin, Eyun Seong-Il
Department of Life Science, Chung-ang University, Seoul, Korea.
Water Environmental Management Department, Korea Water Resources Corporation (K-water), Daejeon, Korea.
Anim Cells Syst (Seoul). 2024 Jan 29;28(1):25-36. doi: 10.1080/19768354.2024.2302529. eCollection 2024.
Harmful substances like the cyanotoxin microcystin-leucine-arginine (MC-LR) are commonly found in eutrophic freshwater environments, posing risks to aquatic organisms. The water flea, , is a well-established model organism for environmental toxicology research. Nevertheless, there is currently insufficient research on the genes that respond to MC-LR in . This study aimed to gain insights into the notable genes that react significantly to MC-LR. In this study, we generated an extensive RNA-Seq sequences isolated from the . HK strain, Han River in Korea. This strain was nourished with a diet of the green microalga and treated with pure MC-LR at a concentration of 36 ug/L. The transcriptome profile in response to the MC-LR treatment was obtained and 336 differentially expressed genes were subjected to Gene Ontology (GO) and euKaryotic Orthologous Groups of proteins analyses. GO enrichment analysis showed that chemical stimulus, amino sugar metabolic and catabolic process, oxidative stress, and detoxification were highly enriched, in reverse, proteolysis and fucosylation were underpresented. Detoxification process related genes such as peroxidase-like, chorion, and thyroid peroxidase-like were enriched for eliminating or neutralizing MC_LR from an organism's body. Furthermore, functional protein classification revealed an upregulation of lipid and inorganic ion transport processes, while amino acid and carbohydrate transport processes were found to be downregulated. These findings offer insights into how organisms respond to ecotoxic stimuli, providing valuable information for understanding adaptation or defense pathways.
像蓝藻毒素微囊藻毒素-亮氨酸-精氨酸(MC-LR)这样的有害物质在富营养化的淡水环境中很常见,对水生生物构成风险。水蚤是环境毒理学研究中成熟的模式生物。然而,目前关于水蚤中对MC-LR作出反应的基因的研究还不足。本研究旨在深入了解对MC-LR有显著反应的重要基因。在本研究中,我们从韩国汉江的HK菌株中生成了大量RNA测序序列。该菌株以绿色微藻为食,并以36微克/升的浓度用纯MC-LR处理。获得了对MC-LR处理的转录组图谱,并对336个差异表达基因进行了基因本体论(GO)和真核生物蛋白质直系同源组分析。GO富集分析表明,化学刺激、氨基糖代谢和分解代谢过程、氧化应激和解毒高度富集,相反,蛋白水解和岩藻糖基化则不明显。过氧化物酶样、绒毛膜和甲状腺过氧化物酶样等解毒过程相关基因富集,用于从生物体中消除或中和MC-LR。此外,功能蛋白分类显示脂质和无机离子转运过程上调,而氨基酸和碳水化合物转运过程下调。这些发现为生物体如何应对生态毒性刺激提供了见解,为理解适应或防御途径提供了有价值的信息。