Shrestha Sadeep, Wiener Howard W, Chowdhury Sabrina, Kajimoto Hidemi, Srinivasasainagendra Vinodh, Mamaeva Olga A, Brahmbhatt Ujval N, Ledee Dolena, Lau Yung, Padilla Luz A, Chen Jake, Dahdah Nagib, Tiwari Hemant K, Portman Michael A
medRxiv. 2024 Feb 1:2024.01.30.24301800. doi: 10.1101/2024.01.30.24301800.
Kawasaki disease (KD) is a multisystem inflammatory illness of infants and young children that can result in acute vasculitis. The pathological walls of afflicted coronary arteries show propensity for forming thrombosis and aneurysms. The mechanism of coronary artery aneurysms (CAA) despite intravenous gamma globulin (IVIG) treatment is not known.
We performed a Whole Genome Sequencing (WGS) association analysis in a racially diverse cohort of KD patients treated with IVIG, both using AHA guidelines. We defined coronary aneurysm (CAA) (N = 234) as coronary z>2.5 and large coronary aneurysm (CAA/L) (N = 92) as z>5.0. We conducted logistic regression models to examine the association of genetic variants with CAA/L during acute KD and with persistence >6 weeks using an additive model between cases and 238 controls with no CAA. We adjusted for age, gender and three principal components of genetic ancestry. We performed functional mapping and annotation (FUMA) analysis and further assessed the predictive risk score of genomic risk loci using the area under the receiver operating characteristic curve (AUC).
The top significant variants associated with CAA/L were in the intergenic regions (rs62154092 p<6.32E-08 most significant). Variants in , and were the most significant non-intergenic SNPs. FUMA identified 12 genomic risk loci with eQTL or chromatin interactions mapped to 48 genes. Of these has been implicated in KD CAA and and has potential functional implications. Genetic risk score using these 12 genomic risk loci yielded an AUC of 0.86.
This pharmacogenomics study provides insights into the pathogenesis of CAA/L in IVIG-treated KD patients. We have identified multiple novel SNPs associated with CAA/L and related genes with potential functional implications. The study shows that genomics can help define the cause of CAA/L to guide management and improve risk stratification of KD patients.
川崎病(KD)是一种可导致急性血管炎的婴幼儿多系统炎症性疾病。受累冠状动脉的病理管壁显示出形成血栓和动脉瘤的倾向。尽管采用静脉注射丙种球蛋白(IVIG)治疗,但冠状动脉瘤(CAA)的发病机制尚不清楚。
我们在一个种族多样的接受IVIG治疗的KD患者队列中进行了全基因组测序(WGS)关联分析,均采用美国心脏协会(AHA)指南。我们将冠状动脉瘤(CAA)(N = 234)定义为冠状动脉z>2.5,将大型冠状动脉瘤(CAA/L)(N = 92)定义为z>5.0。我们进行了逻辑回归模型分析,以研究基因变异与急性KD期间CAA/L以及持续时间>6周之间的关联,使用病例与238例无CAA的对照之间的加性模型。我们对年龄、性别和遗传血统的三个主要成分进行了调整。我们进行了功能定位和注释(FUMA)分析,并使用受试者操作特征曲线(AUC)下的面积进一步评估了基因组风险位点的预测风险评分。
与CAA/L相关的最显著变异位于基因间区域(rs62154092 p<6.32E - 08最显著)。位于 、 和 中的变异是最显著的非基因间单核苷酸多态性(SNP)。FUMA确定了12个基因组风险位点,其表达数量性状基因座(eQTL)或染色质相互作用映射到48个基因。其中 与KD CAA有关, 和 具有潜在的功能意义。使用这12个基因组风险位点的遗传风险评分产生的AUC为0.86。
这项药物基因组学研究为IVIG治疗的KD患者中CAA/L的发病机制提供了见解。我们已经鉴定出多个与CAA/L相关的新型SNP以及具有潜在功能意义的相关基因。该研究表明,基因组学有助于确定CAA/L的病因,以指导管理并改善KD患者的风险分层。