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将人工智能整合到骨肉瘤预后中:SERPINE2 和 CPT1B 生物标志物的预后意义。

Integrating artificial intelligence in osteosarcoma prognosis: the prognostic significance of SERPINE2 and CPT1B biomarkers.

机构信息

Guangxi Academy of Medical Sciences, People's Hospital of Guangxi Zhuang Autonomous Region, Nanning, China.

Guangxi Hospital Division of The First Affiliated Hospital, Sun Yat-Sen University, Nanning, China.

出版信息

Sci Rep. 2024 Feb 21;14(1):4318. doi: 10.1038/s41598-024-54222-6.

Abstract

The principal aim of this investigation is to identify pivotal biomarkers linked to the prognosis of osteosarcoma (OS) through the application of artificial intelligence (AI), with an ultimate goal to enhance prognostic prediction. Expression profiles from 88 OS cases and 396 normal samples were procured from accessible public databases. Prognostic models were established using univariate COX regression analysis and an array of AI methodologies including the XGB method, RF method, GLM method, SVM method, and LASSO regression analysis. Multivariate COX regression analysis was also employed. Immune cell variations in OS were examined using the CIBERSORT software, and a differential analysis was conducted. Routine blood data from 20,679 normal samples and 437 OS cases were analyzed to validate lymphocyte disparity. Histological assessments of the study's postulates were performed through immunohistochemistry and hematoxylin and eosin (HE) staining. AI facilitated the identification of differentially expressed genes, which were utilized to construct a prognostic model. This model discerned that the survival rate in the high-risk category was significantly inferior compared to the low-risk cohort (p < 0.05). SERPINE2 was found to be positively associated with memory B cells, while CPT1B correlated positively with CD8 T cells. Immunohistochemical assessments indicated that SERPINE2 was more prominently expressed in OS tissues relative to adjacent non-tumorous tissues. Conversely, CPT1B expression was elevated in the adjacent non-tumorous tissues compared to OS tissues. Lymphocyte counts from routine blood evaluations exhibited marked differences between normal and OS groups (p < 0.001). The study highlights SERPINE2 and CPT1B as crucial biomarkers for OS prognosis and suggests that dysregulation of lymphocytes plays a significant role in OS pathogenesis. Both SERPINE2 and CPT1B have potential utility as prognostic biomarkers for OS.

摘要

本研究的主要目的是通过人工智能(AI)确定与骨肉瘤(OS)预后相关的关键生物标志物,最终提高预后预测能力。从可访问的公共数据库中获取了 88 例 OS 病例和 396 例正常样本的表达谱。使用单变量 COX 回归分析和一系列 AI 方法(包括 XGB 方法、RF 方法、GLM 方法、SVM 方法和 LASSO 回归分析)建立预后模型。还进行了多变量 COX 回归分析。使用 CIBERSORT 软件检查 OS 中的免疫细胞变化,并进行差异分析。分析了来自 20679 例正常样本和 437 例 OS 病例的常规血液数据以验证淋巴细胞差异。通过免疫组织化学和苏木精和伊红(HE)染色对研究假设进行组织学评估。AI 有助于识别差异表达基因,这些基因用于构建预后模型。该模型发现,高风险组的生存率明显低于低风险组(p<0.05)。SERPINE2 与记忆 B 细胞呈正相关,而 CPT1B 与 CD8 T 细胞呈正相关。免疫组织化学评估表明,SERPINE2 在 OS 组织中的表达明显高于相邻非肿瘤组织。相反,CPT1B 在相邻非肿瘤组织中的表达高于 OS 组织。常规血液评估中的淋巴细胞计数在正常组和 OS 组之间存在显著差异(p<0.001)。该研究强调 SERPINE2 和 CPT1B 是 OS 预后的关键生物标志物,并表明淋巴细胞失调在 OS 发病机制中起重要作用。SERPINE2 和 CPT1B 均具有作为 OS 预后生物标志物的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce28/10881519/d7d74b897197/41598_2024_54222_Fig1_HTML.jpg

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