Tripathi Deepika, Kapoor Arushi, Kant Ravi, Saluja Daman, Sharma Meenakshi
Dr. B.R. Ambedkar Center for Biomedical Research (ACBR), University of Delhi (DU), Delhi, India.
Arch Microbiol. 2024 Feb 23;206(3):118. doi: 10.1007/s00203-024-03840-9.
Candida albicans is a member of the ascomycetes class of fungi and it is an opportunistic pathogen species responsible for a wide range of fungal infections in humans. Bioinformatics and sequencing analysis of Candida proteomics has disclosed that around 69% proteome is still uncharacterized which needs to be annotated with functions. The NCBI-Genome has termed them as hypothetical proteins (HPs) in the whole proteome of Candida. Interpretation of this substantial portion of the proteome can reveal novel pharmacological targets for markers, drug development, and other therapeutics and so on. In this article, we have assigned functional annotation to these hypothetical proteins using bioinformatics methodologies. The advanced and robust computational models have been used to assign the preliminary functions to these putative HPs with high level of confidence. The findings of this study unveil some novel pharmacological targets for drug therapy and vaccines and it would help to identify novel molecular mechanisms underlying the fungal pathogenesis.
白色念珠菌是子囊菌纲真菌的一员,是一种机会致病菌,可导致人类多种真菌感染。对念珠菌蛋白质组进行的生物信息学和测序分析表明,约69%的蛋白质组仍未被表征,需要对其功能进行注释。NCBI基因组将它们在念珠菌整个蛋白质组中称为假设蛋白(HPs)。对这一大部分蛋白质组的解读可以揭示用于标志物、药物开发和其他治疗方法等的新的药理学靶点。在本文中,我们使用生物信息学方法对这些假设蛋白进行了功能注释。先进且强大的计算模型已被用于以高置信度为这些假定的HPs赋予初步功能。本研究结果揭示了一些用于药物治疗和疫苗的新的药理学靶点,这将有助于确定真菌发病机制背后的新分子机制。