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基于网络药理学和体外实验探讨温夏方正丁醇部位联合吉非替尼治疗非小细胞肺癌的作用机制

[Mechanism of n-butanol fraction of Wenxia Formula combining with gefitinib in treating non-small cell lung cancer based on network pharmacology and in vitro experiment].

作者信息

Chen Rui-Jie, Bi Qian-Yu, Shi Jie-Min, Zhong Jing, Han Jin-Tao, Ji Xu-Ming

机构信息

Huzhou Central Hospital Huzhou 313000, China.

School of Basic Medicine, Zhejiang Chinese Medical University Hangzhou 310053, China.

出版信息

Zhongguo Zhong Yao Za Zhi. 2024 Jan;49(2):471-486. doi: 10.19540/j.cnki.cjcmm.20230914.704.

Abstract

This study combined network pharmacology, molecular docking, and in vitro experiments to explore the potential mechanism of the active components of the n-butanol fraction of Wenxia Formula(NWXF) combined with gefitinib(GEF) in treating non-small cell lung cancer(NSCLC). Ultra-performance liquid chromatography-quadrupole Orbitrap mass spectrometry(UPLC-Q-Orbitrap MS) was employed to detect the main chemical components of NWXF. The active components of NWXF were retrieved from SwissADME, and the candidate targets of these active components were retrieved from SwissTargetPrediction. Online Mendelian Inheritance in Man(OMIM) and GeneCards were searched for the targets of NSCLC. Cytoscape 3.9.0 and STRING were employed to build the protein-protein interaction(PPI) network with the common targets shared by NWXF and NSCLC. Gene Ontology(GO) annotation and Kyoto Encyclopedia of Genes and Genomes(KEGG) enrichment were performed in DAVID to predict the potential mechanisms. Finally, molecular docking between the main active ingredients and key targets was conducted in SYBYL-X 2.0. The methyl thiazolyl tetrazolium(MTT) assay was employed to evaluate the inhibitory effects of NWXF and/or GEF on the proliferation of human non-small cell lung cancer cells(A549 and PC-9). Additionally, the impact of NWXF on human embryonic lung fibroblast cells(MRC-5) was assessed. The effectiveness of the drug combination was evaluated based on the Q value. The terminal-deoxynucleoitidyl transferase mediated nick-end labeling(TUNEL) assay was employed to examine the apoptosis of A549 and PC-9 cells treated with NWXF and/or GEF. Quantitative real-time PCR(qRT-PCR) was employed to measure the mRNA levels of epidermal growth factor receptor(EGFR), c-Jun N-terminal kinase(JNK), and Bcl2-associated X protein(Bax) in the A549 and PC-9 cells treated with NWXF and/or GEF. Western blot was employed to determine the protein levels of EGFR, p-EGFR, JNK, p-JNK, and Bax in the A549 and PC-9 cells treated with NWXF and/or GEF. A total of 77 active components, 488 potential targets, and 49 key targets involved in the treatment of NSCLC with NWXF were predicted. The results of GO annotation showed that NWXF may treat NSCLC by regulating the biological processes such as cell proliferation, apoptosis, and protein phosphorylation. KEGG enrichment revealed that the key targets of NWXF in treating NSCLC were enriched in the mitogen-activated protein kinase(MAPK), phosphatidylinositol 3-kinase(PI3K)-protein kinase B(AKT), hypoxia-inducible factor-1(HIF-1), and microRNA-related signaling pathways. Molecular docking results showed that 91.9% of the docking scores were greater than 5, indicating the strong binding capability between main active components and key targets. The cell experiments demonstrated that NWXF combined with GEF synergistically inhibited the proliferation, promoted the apoptosis, decreased p-EGFR/EGFR and p-JNK/JNK values, down-regulated the mRNA levels of EGFR and JNK, and up-regulated the mRNA and protein levels of Bax in A549 and PC-9 cells. In conclusion, NWXF combined with GEF can regulate the EGFR/JNK pathway to promote the apoptosis of NSCLC cells, thus treating NSCLC.

摘要

本研究结合网络药理学、分子对接和体外实验,探讨温夏方正丁醇部位(NWXF)活性成分与吉非替尼(GEF)联合治疗非小细胞肺癌(NSCLC)的潜在机制。采用超高效液相色谱-四极杆轨道阱质谱(UPLC-Q-Orbitrap MS)检测NWXF的主要化学成分。从SwissADME检索NWXF的活性成分,并从SwissTargetPrediction检索这些活性成分的候选靶点。通过在线人类孟德尔遗传(OMIM)和基因卡片搜索NSCLC的靶点。利用Cytoscape 3.9.0和STRING构建NWXF与NSCLC共同靶点的蛋白质-蛋白质相互作用(PPI)网络。在DAVID中进行基因本体(GO)注释和京都基因与基因组百科全书(KEGG)富集分析,以预测潜在机制。最后,在SYBYL-X 2.0中进行主要活性成分与关键靶点之间的分子对接。采用甲基噻唑基四氮唑(MTT)法评估NWXF和/或GEF对人非小细胞肺癌细胞(A549和PC-9)增殖的抑制作用。此外,评估了NWXF对人胚肺成纤维细胞(MRC-5)的影响。基于Q值评估药物组合的有效性。采用末端脱氧核苷酸转移酶介导的缺口末端标记(TUNEL)法检测NWXF和/或GEF处理的A549和PC-9细胞的凋亡情况。采用定量实时聚合酶链反应(qRT-PCR)检测NWXF和/或GEF处理的A549和PC-9细胞中表皮生长因子受体(EGFR)、c-Jun氨基末端激酶(JNK)和Bcl2相关X蛋白(Bax)的mRNA水平。采用蛋白质印迹法检测NWXF和/或GEF处理的A549和PC-9细胞中EGFR、p-EGFR、JNK、p-JNK和Bax的蛋白水平。预测共有77种活性成分、488个潜在靶点和49个参与NWXF治疗NSCLC的关键靶点。GO注释结果表明,NWXF可能通过调节细胞增殖、凋亡和蛋白质磷酸化等生物学过程来治疗NSCLC。KEGG富集分析显示,NWXF治疗NSCLC的关键靶点富集在丝裂原活化蛋白激酶(MAPK)、磷脂酰肌醇3激酶(PI3K)-蛋白激酶B(AKT)、缺氧诱导因子-1(HIF-1)和微小RNA相关信号通路中。分子对接结果显示,91.9%的对接分数大于5,表明主要活性成分与关键靶点之间具有较强的结合能力。细胞实验表明,NWXF与GEF联合可协同抑制A549和PC-9细胞的增殖,促进凋亡,降低p-EGFR/EGFR和p-JNK/JNK值,下调EGFR和JNK的mRNA水平,上调Bax的mRNA和蛋白水平。综上所述,NWXF与GEF联合可调节EGFR/JNK通路,促进NSCLC细胞凋亡,从而治疗NSCLC。

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