Qin Song, Wang Xiaoqin, Ren Yingcong, Feng Banghai, Liu Junya, Yu Hong, Zheng Jie, Chen Huajun, Xing Zhouxiong, Mei Hong
Department of Critical Care Medicine, Affiliated Hospital of Zunyi Medical University, Zunyi 563000, Guizhou, China.
Department of Pediatric, the Second Affiliated Hospital of Zunyi Medical University, Zunyi 563000, Guizhou, China.
Zhonghua Wei Zhong Bing Ji Jiu Yi Xue. 2024 Jan;36(1):33-39. doi: 10.3760/cma.j.cn121430-20230411-00262.
To observe and verify the changes of transcriptome in hyperoxia-induced acute lung injury (HALI), and to further clarify the changes of pathways in HALI.
Twelve healthy male C57BL/6J mice were randomly divided into normoxia group and HALI group according to the random number table, with 6 mice in each group. The mice in the normoxia group were fed normally in the room, and the mice in the HALI group was exposed to 95% oxygen to reproduce the HALI animal model. After 72 hours of hyperoxia exposure, the lung tissues were taken for transcriptome sequencing, and then Kyoto Encyclopedia of Genes and Genomes database (KEGG) pathway enrichment analysis was performed. The pathological changes of lung tissue were observed under light microscope after hematoxylin-eosin (HE) staining. Real-time fluorescence quantitative reverse transcription-polymerase chain reaction (RT-PCR) and Western blotting were used to verify the key molecules in the signal pathways closely related to HALI identified by transcriptomics analysis.
Transcriptomic analysis showed that hyperoxia induced 537 differentially expressed genes in lung tissue of mice as compared with the normoxia group including 239 up-regulated genes and 298 down-regulated genes. Further KEGG pathway enrichment analysis identified 20 most significantly enriched pathway entries, and the top three pathways were ferroptosis signaling pathway, p53 signaling pathway and glutathione (GSH) metabolism signaling pathway. The related genes in the ferroptosis signaling pathway included the up-regulated gene heme oxygenase-1 (HO-1) and the down-regulated gene solute carrier family 7 member 11 (SLC7A11). The related genes in the p53 signaling pathway included the up-regulated gene tumor suppressor gene p53 and the down-regulated gene murine double minute 2 (MDM2). The related gene in the GSH metabolic signaling pathway was up-regulated gene glutaredoxin 1 (Grx1). The light microscope showed that the pulmonary alveolar structure of the normoxia group was normal. In the HALI group, the pulmonary alveolar septum widened and thickened, and the alveolar cavity shrank or disappeared. RT-RCR and Western blotting confirmed that compared with the normoxia group, the mRNA and protein expressions of HO-1 and p53 in lung tissue of the HALI group were significantly increased [HO-1 mRNA (2): 2.16±0.17 vs. 1.00±0.00, HO-1 protein (HO-1/β-actin): 1.05±0.01 vs. 0.79±0.01, p53 mRNA (2): 2.52±0.13 vs. 1.00±0.00, p53 protein (p53/β-actin): 1.12±0.02 vs. 0.58±0.03, all P < 0.05], and the mRNA and protein expressions of Grx1, MDM2, SLC7A11 were significantly decreased [Grx1 mRNA (2): 0.53±0.05 vs. 1.00±0.00, Grx1 protein (Grx1/β-actin): 0.54±0.03 vs. 0.93±0.01, MDM2 mRNA (2): 0.48±0.03 vs. 1.00±0.00, MDM2 protein (MDM2/β-actin): 0.57±0.02 vs. 1.05±0.01, SLC7A11 mRNA (2): 0.50±0.06 vs. 1.00±0.00, SLC7A11 protein (SLC7A11/β-actin): 0.72±0.03 vs. 0.98±0.01, all P < 0.05].
HALI is closely related to ferroptosis, p53 and GSH metabolism signaling pathways. Targeting the key targets in ferroptosis, p53 and GSH metabolism signaling pathways may be an important strategy for the prevention and treatment of HALI.
观察并验证高氧诱导的急性肺损伤(HALI)中转录组的变化,并进一步阐明HALI中信号通路的变化。
将12只健康雄性C57BL/6J小鼠按随机数字表随机分为常氧组和HALI组,每组6只。常氧组小鼠在室内正常饲养,HALI组小鼠暴露于95%氧气中以建立HALI动物模型。高氧暴露72小时后,取肺组织进行转录组测序,然后进行京都基因与基因组百科全书数据库(KEGG)通路富集分析。苏木精-伊红(HE)染色后在光镜下观察肺组织的病理变化。采用实时荧光定量逆转录-聚合酶链反应(RT-PCR)和蛋白质免疫印迹法验证转录组学分析鉴定出的与HALI密切相关的信号通路中的关键分子。
转录组分析显示,与常氧组相比,高氧诱导小鼠肺组织中有537个差异表达基因,其中上调基因239个,下调基因298个。进一步的KEGG通路富集分析确定了20个最显著富集的通路条目,前三条通路为铁死亡信号通路、p53信号通路和谷胱甘肽(GSH)代谢信号通路。铁死亡信号通路中的相关基因包括上调基因血红素加氧酶-1(HO-1)和下调基因溶质载体家族7成员11(SLC7A11)。p53信号通路中的相关基因包括上调基因肿瘤抑制基因p53和下调基因小鼠双微体2(MDM2)。GSH代谢信号通路中的相关基因是上调基因谷氧还蛋白1(Grx1)。光镜显示,常氧组肺泡结构正常。HALI组肺泡间隔增宽、增厚,肺泡腔缩小或消失。RT-PCR和蛋白质免疫印迹法证实,与常氧组相比,HALI组肺组织中HO-1和p53的mRNA和蛋白表达显著增加[HO-1 mRNA(2−ΔΔCt):2.16±0.17比1.00±0.00,HO-1蛋白(HO-1/β-肌动蛋白):1.05±0.01比0.79±0.01,p53 mRNA(2−ΔΔCt):2.52±