Novakov Vitaly, Novakova Olga, Churnosova Maria, Aristova Inna, Ponomarenko Marina, Reshetnikova Yuliya, Churnosov Vladimir, Sorokina Inna, Ponomarenko Irina, Efremova Olga, Orlova Valentina, Batlutskaya Irina, Polonikov Alexey, Reshetnikov Evgeny, Churnosov Mikhail
Department of Medical Biological Disciplines, Belgorod State National Research University, Belgorod, 308015, Russia.
Department of Biology, Medical Genetics and Ecology and Research Institute for Genetic and Molecular Epidemiology, Kursk State Medical University, Kursk, 305041, Russia.
Arthroplasty. 2024 Mar 1;6(1):12. doi: 10.1186/s42836-023-00229-9.
We investigated the effect of obesity on the association of genome-wide associative studies (GWAS)-significant genes with the risk of knee osteoarthritis (KOA).
All study participants (n = 1,100) were divided into 2 groups in terms of body mass index (BMI): BMI ≥ 30 (255 KOA patients and 167 controls) and BMI < 30 (245 KOA and 433 controls). The eight GWAS-significant KOA single nucleotide polymorphisms (SNP) of six candidate genes, such as LYPLAL1 (rs2820436, rs2820443), SBNO1 (rs1060105, rs56116847), WWP2 (rs34195470), NFAT5 (rs6499244), TGFA (rs3771501), GDF5 (rs143384), were genotyped. Logistic regression analysis (gPLINK online program) was used for SNPs associations study with the risk of developing KOA into 2 groups (BMI ≥ 30 and BMI < 30) separately. The functional effects of KOA risk loci were evaluated using in silico bioinformatic analysis.
Multidirectional relationships of the rs143384 GDF5 with KOA in BMI-different groups were found: This SNP was KOA protective locus among individuals with BMI ≥ 30 (OR 0.41 [95%CI 0.20-0.94] recessive model) and was disorder risk locus among individuals with BMI < 30 (OR 1.32 [95%CI 1.05-1.65] allele model, OR 1.44 [95%CI 1.10-1.86] additive model, OR 1.67 [95%CI 1.10-2.52] dominant model). Polymorphism rs143384 GDF5 manifested its regulatory effects in relation to nine genes (GDF5, CPNE1, EDEM2, ERGIC3, GDF5OS, PROCR, RBM39, RPL36P4, UQCC1) in adipose tissue, which were involved in the regulation of pathways of apoptosis of striated muscle cells.
In summary, the effect of obesity on the association of the rs143384 GDF5 with KOA was shown: the "protective" value of this polymorphism in the BMI ≥ 30 group and the "risk" meaning in BMI < 30 cohort.
我们研究了肥胖对全基因组关联研究(GWAS)中与膝关节骨关节炎(KOA)风险相关的显著基因的影响。
根据体重指数(BMI)将所有研究参与者(n = 1100)分为两组:BMI≥30(255例KOA患者和167例对照)和BMI<30(245例KOA患者和433例对照)。对六个候选基因的八个GWAS显著的KOA单核苷酸多态性(SNP)进行基因分型,这些基因包括LYPLAL1(rs2820436,rs2820443)、SBNO1(rs1060105,rs56116847)、WWP2(rs34195470)、NFAT5(rs6499244)、TGFA(rs3771501)、GDF5(rs143384)。使用逻辑回归分析(gPLINK在线程序)分别对两组(BMI≥30和BMI<30)中SNP与发生KOA风险的关联进行研究。使用计算机生物信息学分析评估KOA风险位点的功能效应。
发现rs143384 GDF5在BMI不同组中与KOA存在多向关系:该SNP在BMI≥30的个体中是KOA保护位点(隐性模型中OR为0.41 [95%CI为0.20 - 0.94]),而在BMI<30的个体中是疾病风险位点(等位基因模型中OR为1.32 [95%CI为1.05 - 1.65],加性模型中OR为1.44 [95%CI为1.10 - 1.86],显性模型中OR为1.67 [95%CI为1.10 - 2.52])。rs143384 GDF5多态性在脂肪组织中对九个基因(GDF5、CPNE1、EDEM2、ERGIC3、GDF5OS、PROCR、RBM39、RPL36P4、UQCC1)表现出调节作用,这些基因参与横纹肌细胞凋亡途径的调节。
总之,研究表明肥胖对rs143384 GDF5与KOA的关联有影响:该多态性在BMI≥30组中具有“保护”价值,而在BMI<30队列中具有“风险”意义。