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设计、合成、生物评价及一些新型芳基和杂芳基硫代甘露糖苷作为 FimH 拮抗剂的对接研究。

Design, synthesis, biological evaluation and docking study of some new aryl and heteroaryl thiomannosides as FimH antagonists.

机构信息

Pharmaceutical Organic Chemistry Department, Faculty of Pharmacy, Assiut University, Assiut 71526, Egypt.

Department of Microbiology and Immunology, Faculty of Pharmacy, Assiut University, Assiut, 71526, Egypt.

出版信息

Bioorg Chem. 2024 Apr;145:107258. doi: 10.1016/j.bioorg.2024.107258. Epub 2024 Mar 2.

Abstract

FimH is a mannose-recognizing lectin that is expressed by Escherichia coli guiding its ability to adhere and infect cells. It is involved in pathogenesis of urinary tract infections and Chron's disease. Several X-ray structure-guided ligand design studies were extensively utilized in the discovery and optimization of small molecule aryl mannoside FimH antagonists. These antagonists retain key specific interactions of the mannose scaffolds with the FimH carbohydrate recognition domains. Thiomannosides are attractive and stable scaffolds, and this work reports the synthesis of some of their new aryl and heteroaryl derivatives as FimH antagonists. FimH-competitive binding assays as well as biofilm inhibition of the new compounds (24-32) were determined in comparison with the reference n-heptyl α-d-mannopyranoside (HM). The affinity among these compounds was found to be governed by the structure of the aryl and heteroarylf aglycones. Two compounds 31 and 32 revealed higher activity than HM. Molecular docking and total hydrophobic to topological polar surface area ratio calculations attributed to explain the obtained biological results. Finally, the SAR study suggested that introducing an aryl or heteroaryl aglycone of sufficient hydrophobicity and of proper orientation within the tyrosine binding site considerably enhance binding affinity. The potent and synthetically feasible FimH antagonists described herein hold potential as leads for the development of sensors for detection of E. coli and treatment of its diseases.

摘要

FimH 是一种甘露糖识别凝集素,由大肠杆菌表达,指导其黏附和感染细胞的能力。它参与尿路感染和 Chron 病的发病机制。几项基于 X 射线结构引导的配体设计研究广泛应用于小分子芳基甘露糖苷 FimH 拮抗剂的发现和优化。这些拮抗剂保留了甘露糖支架与 FimH 碳水化合物识别结构域的关键特异性相互作用。硫代甘露糖苷是有吸引力和稳定的支架,本工作报道了一些它们的新型芳基和杂芳基衍生物作为 FimH 拮抗剂的合成。通过与参考的正庚基α-d-甘露吡喃糖苷(HM)比较,测定了新化合物(24-32)的 FimH 竞争性结合测定和生物膜抑制。发现这些化合物之间的亲和力受芳基和杂芳基糖苷配基的结构控制。两种化合物 31 和 32 的活性高于 HM。分子对接和总疏水性到拓扑极性表面积比计算归因于解释所获得的生物学结果。最后,SAR 研究表明,在酪氨酸结合位点中引入足够疏水性和适当取向的芳基或杂芳基糖苷配基可以显著提高结合亲和力。本文所述的有效且具有合成可行性的 FimH 拮抗剂具有作为大肠杆菌检测传感器和治疗其疾病的先导物的潜力。

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