没食子酸及其衍生物(N-烷基没食子酰胺)作为乳腺癌MCF-7细胞凋亡剂的分子对接和ADMET特性分析。

Molecular docking, ADMET profiling of gallic acid and its derivatives (N-alkyl gallamide) as apoptosis agent of breast cancer MCF-7 Cells.

作者信息

Arsianti Ade, Nur Azizah Norma, Erlina Linda

机构信息

Master's Programme in Biomedical Science, Faculty of Medicine, Universitas Indonesia, Jakarta, 10360, Indonesia.

Drug Development Research Center, Indonesian Medical Education and Research Institute (IMERI), Jakarta, 10630, Indonesia.

出版信息

F1000Res. 2024 Feb 8;11:1453. doi: 10.12688/f1000research.127347.2. eCollection 2022.

Abstract

BACKGROUND

In 2020, breast cancer has become the most common cancer in the world and in Indonesia. Searching for anticancer drugs using computational methods is considered more effective and selective than other methods. Gallic acid and its derivatives (esters and amides) are compounds that have biological activities such as anticancer effects. The purpose of this study was to analyse the molecular modelling and ADMET (Adsorption, Distribution, Metabolism, Excretion and Toxicity) profile of gallic acid derivative compounds (N-alkyl gallamides) as anticancer agents.

METHODS

Target proteins were selected by analysis of protein-protein and drug-protein interactions. Molecular modelling was done by molecular docking and molecular dynamic simulation. Predictive analysis of the ADMET profile of gallic acid and its derivatives (N-alkyl gallamide) was conducted using Marvin Sketch, Swissadme, protox II, and pkCSM pharmacokinetics. The selected target proteins were JUN, AKT1, CASP3, and CASP7.

RESULTS

Compounds N-octyl gallamide, N-ters-butyl gallamide, and N-isoamil gallamide were the three best gallic acid derivatives based on molecular modelling analysis of target proteins associated with breast cancer. The ADMET profile of the N-alkyl gallamide compound is predictable and shows a good profile as a candidate for anticancer drugs.

CONCLUSION

N-octyl gallamide, N-ters-butyl gallamide, and N-isoamil gallamide have potential as anti-breast cancer agents.

摘要

背景

2020年,乳腺癌已成为全球及印度尼西亚最常见的癌症。利用计算方法寻找抗癌药物被认为比其他方法更有效、更具选择性。没食子酸及其衍生物(酯类和酰胺类)是具有抗癌等生物活性的化合物。本研究的目的是分析没食子酸衍生物化合物(N-烷基没食子酰胺)作为抗癌剂的分子建模和ADMET(吸收、分布、代谢、排泄和毒性)概况。

方法

通过分析蛋白质-蛋白质和药物-蛋白质相互作用来选择靶蛋白。分子建模通过分子对接和分子动力学模拟完成。使用Marvin Sketch、Swissadme、protox II和pkCSM药代动力学对没食子酸及其衍生物(N-烷基没食子酰胺)的ADMET概况进行预测分析。所选靶蛋白为JUN、AKT1、CASP3和CASP7。

结果

基于与乳腺癌相关的靶蛋白的分子建模分析,N-辛基没食子酰胺、N-叔丁基没食子酰胺和N-异戊基没食子酰胺是三种最佳的没食子酸衍生物。N-烷基没食子酰胺化合物的ADMET概况是可预测的,并且作为抗癌药物候选物显示出良好的概况。

结论

N-辛基没食子酰胺、N-叔丁基没食子酰胺和N-异戊基没食子酰胺有作为抗乳腺癌药物的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0b17/10925480/e8b73b3a1cea/f1000research-11-162222-g0000.jpg

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