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在 quasi-SMILES 中对局部对称片段的计算是否能提高对蝌蚪毒性的 QSAR 模型的预测能力?

Does the accounting of the local symmetry fragments in quasi-SMILES improve the predictive potential of the QSAR models of toxicity toward tadpoles?

机构信息

Department of Environmental Health Science, Laboratory of Environmental Chemistry and Toxicology, Istituto di Ricerche Farmacologiche Mario Negri IRCCS, Milano, Italy.

出版信息

Toxicol Mech Methods. 2024 Sep;34(7):737-742. doi: 10.1080/15376516.2024.2332617. Epub 2024 Apr 8.

Abstract

Models of toxicity to tadpoles have been developed as single parameters based on special descriptors which are sums of correlation weights, molecular features, and experimental conditions. This information is presented by quasi-SMILES. Fragments of local symmetry (FLS) are involved in the development of the model and the use of FLS correlation weights improves their predictive potential. In addition, the index of ideality correlation () and correlation intensity index () are compared. These two potential predictive criteria were tested in models built through Monte Carlo optimization. The was more effective than for the models considered here.

摘要

已开发出基于特殊描述符的毒性对蝌蚪模型,这些描述符是相关权重、分子特征和实验条件的总和。这些信息由准 SMILES 呈现。局部对称片段(FLS)参与模型的开发,使用 FLS 相关权重可提高其预测潜力。此外,还比较了理想相关指数()和相关强度指数()。这两个潜在的预测标准在通过蒙特卡罗优化构建的模型中进行了测试。对于这里考虑的模型,指数比更有效。

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