Department of Orthopedics, Xiangyang No.1 People's Hospital, Hubei University of Medicine, Xiangyang, China.
Key Laboratory of Zebrafish Modeling and Drug Screening for Human Diseases of Xiangyang City, Department of Obstetrics and Gynaecology, Xiangyang No. 1 People's Hospital, Hubei University of Medicine, Xiangyang, China.
Medicine (Baltimore). 2024 Apr 5;103(14):e37642. doi: 10.1097/MD.0000000000037642.
Pyroptosis is a programmed cell death, which has garnered increasing attention because it relates to the immune and therapy response. However, few studies focus on the application of pyroptosis-related genes (PRGs) in predicting osteosarcoma (OS) patients' prognoses. In this study, the gene expression and clinical information of OS patients were downloaded from the Therapeutically Applicable Research to Generate Effective Treatments (TARGET) database. Based on these PRGs and unsupervised clustering analysis, all OS samples can be classified into 2 clusters. The 8 key differential expressions for PRGs (LAG3, ITGAM, CCL2, TLR4, IL2RA, PTPRC, FCGR2B, and CD5) were established through the univariate Cox regression and utilized to calculate the risk score of all samples. According to the 8-gene signature, OS samples can be divided into high and low-risk groups and correlation analysis can be performed using immune cell infiltration and immune checkpoints. Finally, we developed a nomogram to improve the PRG-predictive model in clinical application. We verified the predictive performance using receiver operating characteristic (ROC) and calibration curves. There were significant differences in survival, immune cell infiltration and immune checkpoints between the low and high-risk groups. A nomogram was developed with clinical indicators and the risk scores were effective in predicting the prognosis of patients with OS. In this study, a prognostic model was constructed based on 8 PRGs were proved to be independent prognostic factors of OS and associated with tumor immune microenvironment. These 8 prognostic genes were involved in OS development and may serve as new targets for developing therapeutic drugs.
细胞焦亡是一种程序性细胞死亡,与免疫和治疗反应有关,因此受到越来越多的关注。然而,很少有研究关注焦亡相关基因(PRGs)在预测骨肉瘤(OS)患者预后中的应用。在本研究中,从治疗性应用研究以产生有效的治疗方法(TARGET)数据库中下载了 OS 患者的基因表达和临床信息。基于这些 PRGs 和无监督聚类分析,所有 OS 样本可分为 2 类。通过单变量 Cox 回归确定了 8 个关键的 PRGs 差异表达(LAG3、ITGAM、CCL2、TLR4、IL2RA、PTPRC、FCGR2B 和 CD5),并利用这些差异表达计算所有样本的风险评分。根据 8 基因特征,OS 样本可分为高低风险组,并可进行免疫细胞浸润和免疫检查点的相关性分析。最后,我们开发了一个列线图来提高 PRG 预测模型在临床应用中的性能。我们使用接受者操作特征(ROC)和校准曲线来验证预测性能。高低风险组之间的生存、免疫细胞浸润和免疫检查点存在显著差异。列线图由临床指标和风险评分构建,可有效预测 OS 患者的预后。在这项研究中,基于 8 个 PRGs 的预后模型被证明是 OS 的独立预后因素,并与肿瘤免疫微环境相关。这 8 个预后基因参与 OS 的发展,可能成为开发治疗药物的新靶点。