The Fifth Affiliated Hospital of Guangzhou Medical University, GuangZhou, Republic of China.
KingMed School of Laboratory Medicine, GuangZhou, Republic of China.
Genet Test Mol Biomarkers. 2024 Jun;28(6):233-242. doi: 10.1089/gtmb.2023.0229. Epub 2024 May 17.
Evaluating the association between a single nucleotide polymorphism in the 3' untranslated region (3'UTR) of the miRNA binding site of the gene and the occurrence and development of chronic obstructive pulmonary disease (COPD) and providing information to aid in the early detection and treatment of COPD. The regulatory single nuclear polymorphisms (SNPs) located in 3'UTR were searched by using the dbSNP database and miRNA binding site prediction database. Meanwhile, samples from COPD patients and healthy controls in the same period were used for verification. The clinical baseline information of all subjects was collected, and the transcription level and protein expression level of and the expression level of inflammatory factors downstream of were detected. The effects of SNPs' single nucleotide changes on the transcription and expression of inflammatory factors were analyzed. The study included 418 participants (249 in the COPD group and 169 in the control group). SNPs with miRNA binding sites include rs10754558 (G > C), rs1664774076 (ATAT > del), and rs1664775106 (C > G). Furthermore, two genotypes, GCG and GCA, were discovered to have a linkage mutation at 3'UTR 459-461. COPD susceptibility is tightly associated with the expression of the rs1664774076 del/del genotype, and the risk of COPD increased by 2.770 times ( = 0.003). Type 459-461 GCA was substantially related to the likelihood of developing COPD at various stages ( < 0.05). Except for rs10754558, all homozygous mutants increased mRNA and protein levels. had the greatest area under the receiver operating characteristic (ROC) curve for predicting the development and diagnosis of COPD when compared with its downstream inflammatory variables (AUC = 0.9291). The rs1664774076 del/del genotype is a COPD susceptibility gene, and the GCA genotype at 459-461 can be used as an early predictor of COPD exacerbation. The 3'UTR polymorphism may alter the loss of miRNA binding sites, leading to an increase in expression. In the development of COPD, has a better diagnostic value than traditional inflammatory factors. The Clinical Trials Registration number Z: protocol KY01-2020-11-06.
评估微小 RNA 结合位点基因 3'非翻译区(3'UTR)中单核苷酸多态性与慢性阻塞性肺疾病(COPD)发生发展的关系,并提供有助于 COPD 早期发现和治疗的信息。使用 dbSNP 数据库和微小 RNA 结合位点预测数据库搜索位于 3'UTR 的调节性单核苷酸多态性(SNP)。同时,对同期 COPD 患者和健康对照者的样本进行验证。收集所有受试者的临床基线资料,检测 、下游炎症因子的转录水平和蛋白表达水平。分析 SNP 单核苷酸变化对炎症因子转录和表达的影响。该研究共纳入 418 名受试者(COPD 组 249 名,对照组 169 名)。具有微小 RNA 结合位点的 SNP 包括 rs10754558(G > C)、rs1664774076(ATAT > del)和 rs1664775106(C > G)。此外,在 3'UTR459-461 处发现了两种基因型 GCG 和 GCA 的连锁突变。COPD 易感性与 rs1664774076del/del 基因型的表达密切相关,COPD 风险增加 2.770 倍( = 0.003)。459-461 型 GCA 与各阶段 COPD 发病的可能性有显著关系( < 0.05)。除 rs10754558 外,所有纯合突变均增加了 mRNA 和蛋白水平。与下游炎症变量相比, 预测 COPD 发生和诊断的受试者工作特征(ROC)曲线下面积(AUC)最大( = 0.9291)。rs1664774076del/del 基因型是 COPD 的易感基因,459-461 处的 GCA 基因型可作为 COPD 加重的早期预测指标。3'UTR 多态性可能改变微小 RNA 结合位点的丢失,导致 表达增加。在 COPD 的发展过程中, 比传统炎症因子具有更好的诊断价值。临床试验注册号 Z:协议 KY01-2020-11-06。