Department of Psychiatry and Psychotherapy, University Medicine Greifswald, 17475 Greifswald, Germany.
Department of Pharmacodynamics, Faculty of Pharmaceutical Sciences, Semmelweis University, Nagyvárad tér 4., H-1089 Budapest, Hungary; NAP3.0-SE Neuropsychopharmacology Research Group, Hungarian Brain Research Program, Semmelweis University, Üllői út 26., H-1085 Budapest, Hungary.
J Affect Disord. 2024 Aug 15;359:382-391. doi: 10.1016/j.jad.2024.05.126. Epub 2024 May 26.
Major depressive disorder (MDD) is considerably heterogeneous in terms of comorbidities, which may hamper the disentanglement of its biological mechanism. In a previous study, we classified the lifetime trajectories of MDD-related multimorbidities into seven distinct clusters, each characterized by unique genetic and environmental risk-factor profiles. The current objective was to investigate genome-wide gene-by-environment (G × E) interactions with childhood trauma burden, within the context of these clusters.
We analyzed 77,519 participants and 6,266,189 single-nucleotide polymorphisms (SNPs) of the UK Biobank database. Childhood trauma burden was assessed using the Childhood Trauma Screener (CTS). For each cluster, Plink 2.0 was used to calculate SNP × CTS interaction effects on the participants' cluster membership probabilities. We especially focused on the effects of 31 candidate genes and associated SNPs selected from previous G × E studies for childhood maltreatment's association with depression.
At SNP-level, only the high-multimorbidity Cluster 6 revealed a genome-wide significant SNP rs145772219. At gene-level, MPST and PRH2 were genome-wide significant for the low-multimorbidity Clusters 1 and 3, respectively. Regarding candidate SNPs for G × E interactions, individual SNP results could be replicated for specific clusters. The candidate genes CREB1, DBH, and MTHFR (Cluster 5) as well as TPH1 (Cluster 6) survived multiple testing correction.
CTS is a short retrospective self-reported measurement. Clusters could be influenced by genetics of individual disorders.
The first G × E GWAS for MDD-related multimorbidity trajectories successfully replicated findings from previous G × E studies related to depression, and revealed risk clusters for the contribution of childhood trauma.
重度抑郁症(MDD)在合并症方面存在显著异质性,这可能会阻碍其生物学机制的研究。在之前的研究中,我们将 MDD 相关的多系统合并症的终生轨迹分为七个不同的聚类,每个聚类都有独特的遗传和环境风险因素特征。本研究旨在探讨这些聚类中,童年创伤负担与全基因组范围内基因-环境(G×E)相互作用。
我们分析了 UK Biobank 数据库中的 77519 名参与者和 6266189 个单核苷酸多态性(SNP)。使用儿童创伤筛查器(CTS)评估童年创伤负担。对于每个聚类,使用 Plink 2.0 计算 SNP×CTS 交互作用对参与者聚类成员概率的影响。我们特别关注从之前的 G×E 研究中选择的 31 个候选基因和相关 SNP,这些研究表明童年期虐待与抑郁有关。
在 SNP 水平上,只有高合并症聚类 6 显示出全基因组显著 SNP rs145772219。在基因水平上,低合并症聚类 1 和 3 分别与 MPST 和 PRH2 显著相关。对于候选基因 SNP 之间的 G×E 相互作用,特定聚类的个体 SNP 结果可以复制。候选基因 CREB1、DBH 和 MTHFR(聚类 5)以及 TPH1(聚类 6)在多重检验校正后仍然显著。
CTS 是一种简短的回顾性自我报告测量。聚类可能受个体疾病遗传的影响。
这是第一项针对 MDD 相关多系统合并症轨迹的 G×E GWAS,成功复制了之前与抑郁相关的 G×E 研究的结果,并揭示了童年创伤对风险聚类的贡献。