Wu Emily J, Kelly Andrew W, Iuzzolino Luca, Lee Alfred Y, Zhu Xiaolong
Analytical Research & Development, Merck & Co., Inc., Rahway, New Jersey, 07065, United States.
Modeling & Informatics, Discovery Chemistry, Merck & Co., Inc., Rahway, New Jersey, 07065, United States.
Angew Chem Int Ed Engl. 2024 Aug 19;63(34):e202406214. doi: 10.1002/anie.202406214. Epub 2024 Jul 17.
Crystal polymorphism, characterized by different packing arrangements of the same compound, strongly ties to the physical properties of a molecule. Determining the polymorphic landscape is complex and time-consuming, with the number of experimentally observed polymorphs varying widely from molecule to molecule. Furthermore, disappearing polymorphs, the phenomenon whereby experimentally observed forms cannot be reproduced, pose a significant challenge for the pharmaceutical industry. Herein, we focused on oxindole (OX), a small rigid molecule with four known polymorphs, including a reported disappearing form. Using crystal structure prediction (CSP), we assessed OX solid-state landscape and thermodynamic stability by comparing predicted structures with experimentally known forms. We then performed melt and solution crystallization in bulk and nanoconfinement to validate our predictions. These experiments successfully reproduced the known forms and led to the discovery of four novel polymorphs. Our approach provided insights into reconstructing disappearing polymorphs and building more comprehensive polymorph landscapes. These results also establish a new record of packing polymorphism for rigid molecules.
晶体多晶型现象,其特征在于同一化合物的不同堆积排列方式,与分子的物理性质密切相关。确定多晶型情况既复杂又耗时,实验观察到的多晶型数量因分子而异,差异很大。此外,消失的多晶型现象,即实验观察到的晶型无法重现的现象,给制药行业带来了重大挑战。在此,我们聚焦于氧化吲哚(OX),这是一种具有四个已知多晶型的小刚性分子,包括一种已报道的消失晶型。利用晶体结构预测(CSP),我们通过将预测结构与实验已知晶型进行比较,评估了OX的固态情况和热力学稳定性。然后,我们在本体和纳米限域条件下进行了熔融结晶和溶液结晶,以验证我们的预测。这些实验成功重现了已知晶型,并发现了四种新的多晶型。我们的方法为重建消失的多晶型和构建更全面的多晶型情况提供了见解。这些结果也创造了刚性分子堆积多晶型的新纪录。