Yu Jiaming, Zhang Yue, Zhang Li, Shi Jie, Wang Kun, Yuan Weize, Lin Zexu, Ning Shangqian, Wang Bohao, Wang Xinye, Qiu Yuyang, Hsiang Tom, Zhang Lixin, Liu Xueting, Zhu Guoliang
State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai 200237, China.
Department of Chemistry, Boston University, Boston, MA, USA.
Synth Syst Biotechnol. 2024 May 11;9(4):684-693. doi: 10.1016/j.synbio.2024.05.006. eCollection 2024 Dec.
Four new -acylated aminoalkanoic acids, namely clonoroseins E-H (-), together with three previously identified analogs, clonoroseins A, B, and D (-), were identified from the endophytic fungus strain 15020 (CR15020), using Feature-based Molecular Networking (FBMN). The elucidation of their chemical structures, including their absolute configurations, was achieved through spectroscopic analysis combined with quantum chemical calculations. Bioinformatics analyses suggested that an iterative type I HR-PKS (CrsE) generates the polyketide side chain of these clonoroseins. Furthermore, a downstream adenylate-forming enzyme of the PKS (CrsD) was suspected to function as an amide synthetase. CrsD potentially facilitates the transformation of the polyketide moiety into an acyl-AMP intermediate, followed by nucleophilic substitution with either β-alanine or γ-aminobutyric acid to produce amide derivatives. These findings significantly expand our understanding of PKS-related products originating from and also underscore the powerful application of FBMN analytical methods in characterization of new compounds.
利用基于特征的分子网络(FBMN),从内生真菌菌株15020(CR15020)中鉴定出四种新的酰化氨基链烷酸,即克隆玫瑰菌素E-H(-),以及三种先前鉴定出的类似物,克隆玫瑰菌素A、B和D(-)。通过光谱分析结合量子化学计算确定了它们的化学结构,包括它们的绝对构型。生物信息学分析表明,一种迭代型I聚酮合酶(CrsE)生成了这些克隆玫瑰菌素的聚酮侧链。此外,怀疑聚酮合酶的下游腺苷酸形成酶(CrsD)充当酰胺合成酶。CrsD可能促进聚酮部分转化为酰基-AMP中间体,随后与β-丙氨酸或γ-氨基丁酸进行亲核取代以产生酰胺衍生物。这些发现显著扩展了我们对源自[具体来源未提及]的聚酮合酶相关产物的理解,也强调了FBMN分析方法在新化合物表征中的强大应用。