GEOMAR Helmholtz-Center for Ocean Research Kiel, Marine Evolutionary Ecology, Kiel, Germany.
Evolutionary Dynamics Group, Centre for Cancer Genomics and Computational Biology, Barts Cancer Institute, Queen Mary University of London, London, UK.
Nat Ecol Evol. 2024 Jul;8(7):1327-1336. doi: 10.1038/s41559-024-02439-z. Epub 2024 Jun 10.
Age and longevity are key parameters for demography and life-history evolution of organisms. In clonal species, a widespread life history among animals, plants, macroalgae and fungi, the sexually produced offspring (genet) grows indeterminately by producing iterative modules, or ramets, and so obscure their age. Here we present a novel molecular clock based on the accumulation of fixed somatic genetic variation that segregates among ramets. Using a stochastic model, we demonstrate that the accumulation of fixed somatic genetic variation will approach linearity after a lag phase, and is determined by the mitotic mutation rate, without direct dependence on asexual generation time. The lag phase decreased with lower stem cell population size, number of founder cells for the formation of new modules, and the ratio of symmetric versus asymmetric cell divisions. We calibrated the somatic genetic clock on cultivated eelgrass Zostera marina genets (4 and 17 years respectively). In a global data set of 20 eelgrass populations, genet ages were up to 1,403 years. The somatic genetic clock is applicable to any multicellular clonal species where the number of founder cells is small, opening novel research avenues to study longevity and, hence, demography and population dynamics of clonal species.
年龄和寿命是生物种群和生活史演化的关键参数。在无性繁殖物种中,一种广泛存在于动物、植物、大型藻类和真菌中的生活史,其有性生殖产生的后代(遗传体)通过产生迭代模块或无性繁殖体而无限生长,从而掩盖了其年龄。在这里,我们提出了一种基于固定体细胞遗传变异积累的新型分子钟,这些变异在无性繁殖体中分离。我们使用随机模型证明,在滞后阶段之后,固定体细胞遗传变异的积累将趋于线性,并且由有丝分裂突变率决定,而不直接依赖于无性世代时间。滞后阶段随干细胞种群数量、新模块形成的起始细胞数量以及对称与不对称细胞分裂的比例的降低而降低。我们在栽培的鳗草(Zostera marina)遗传体上对体细胞遗传钟进行了校准(分别为 4 年和 17 年)。在全球 20 个鳗草种群的数据集,遗传体的年龄高达 1403 年。体细胞遗传钟适用于任何多细胞无性繁殖物种,其中起始细胞数量较少,为研究无性繁殖物种的长寿以及由此而来的种群动态和种群动态开辟了新的研究途径。