Department of Urology, Innovation Institute for Integration of Medicine and Engineering, West China Hospital, Sichuan University, Chengdu, Sichuan, People's Republic of China.
Program in Genetic Epidemiology and Statistical Genetics, Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Hum Genomics. 2024 Jun 11;18(1):60. doi: 10.1186/s40246-024-00627-3.
Epidemiological studies have revealed a significant association between impaired kidney function and certain mental disorders, particularly bipolar disorder (BIP) and major depressive disorder (MDD). However, the evidence regarding shared genetics and causality is limited due to residual confounding and reverse causation.
In this study, we conducted a large-scale genome-wide cross-trait association study to investigate the genetic overlap between 5 kidney function biomarkers (eGFRcrea, eGFRcys, blood urea nitrogen (BUN), serum urate, and UACR) and 2 mental disorders (MDD, BIP). Summary-level data of European ancestry were extracted from UK Biobank, Chronic Kidney Disease Genetics Consortium, and Psychiatric Genomics Consortium.
Using LD score regression, we found moderate but significant genetic correlations between kidney function biomarker traits on BIP and MDD. Cross-trait meta-analysis identified 1 to 19 independent significant loci that were found shared among 10 pairs of 5 kidney function biomarkers traits and 2 mental disorders. Among them, 3 novel genes: SUFU, IBSP, and PTPRJ, were also identified in transcriptome-wide association study analysis (TWAS), most of which were observed in the nervous and digestive systems (FDR < 0.05). Pathway analysis showed the immune system could play a role between kidney function biomarkers and mental disorders. Bidirectional mendelian randomization analysis suggested a potential causal relationship of kidney function biomarkers on BIP and MDD.
In conclusion, the study demonstrated that both BIP and MDD shared genetic architecture with kidney function biomarkers, providing new insights into their genetic architectures and suggesting that larger GWASs are warranted.
流行病学研究表明,肾功能受损与某些精神障碍之间存在显著关联,尤其是双相情感障碍(BIP)和重度抑郁症(MDD)。然而,由于残余混杂和反向因果关系,关于共同遗传和因果关系的证据有限。
在这项研究中,我们进行了一项大规模的全基因组跨性状关联研究,以调查 5 个肾功能生物标志物(eGFRcrea、eGFRcys、血尿素氮(BUN)、血清尿酸和 UACR)和 2 种精神障碍(MDD、BIP)之间的遗传重叠。我们从英国生物库、慢性肾脏病遗传学联盟和精神疾病基因组学联盟提取了欧洲血统的汇总水平数据。
使用 LD 分数回归,我们发现肾功能生物标志物性状与 BIP 和 MDD 之间存在中度但显著的遗传相关性。跨性状荟萃分析确定了 1 到 19 个独立的显著位点,这些位点在 10 对 5 个肾功能生物标志物性状和 2 种精神障碍之间是共有的。其中,在转录组全关联研究分析(TWAS)中还发现了 3 个新基因:SUFU、IBSP 和 PTPRJ,其中大多数基因在神经系统和消化系统中观察到(FDR < 0.05)。途径分析表明,免疫系统可能在肾功能生物标志物和精神障碍之间发挥作用。双向孟德尔随机化分析表明,肾功能生物标志物与 BIP 和 MDD 之间存在潜在的因果关系。
总之,该研究表明 BIP 和 MDD 与肾功能生物标志物共享遗传结构,为其遗传结构提供了新的见解,并表明需要进行更大规模的全基因组关联研究。