Fong Aisha, Rochus Christina M, Shandilya Umesh K, Muniz Maria M M, Sharma Ankita, Schenkel Flavio S, Karrow Niel A, Baes Christine F
Department of Animal Biosciences, Centre for Genetic Improvement of Livestock, University of Guelph, Guelph, ON, N1G 2W1, Canada.
The Roslin Institute, The Royal (Dick) School of Veterinary Studies, The University of Edinburgh, Easter Bush Campus, Midlothian, EH25 9RG, UK.
BMC Genom Data. 2024 Jun 12;25(1):58. doi: 10.1186/s12863-024-01234-w.
Johne's disease is a chronic wasting disease caused by the bacterium Mycobacterium avium subspecies paratuberculosis (MAP). Johne's disease is highly contagious and MAP infection in dairy cattle can eventually lead to death. With no available treatment for Johne's disease, genetic selection and improvements in management practices could help reduce its prevalence. In a previous study, the gene coding interleukin-10 receptor subunit alpha (IL10Rα) was associated with Johne's disease in dairy cattle. Our objective was to determine how IL10Rα affects the pathogenesis of MAP by examining the effect of a live MAP challenge on a mammary epithelial cell line (MAC-T) that had IL10Rα knocked out using CRISPR/cas9. The wild type and the IL10Rα knockout MAC-T cell lines were exposed to live MAP bacteria for 72 h. Thereafter, mRNA was extracted from infected and uninfected cells. Differentially expressed genes were compared between the wild type and the IL10Rα knockout cell lines. Gene ontology was performed based on the differentially expressed genes to determine which biological pathways were involved.
Immune system processes pathways were targeted to determine the effect of IL10Rα on the response to MAP infection. There was a difference in immune response between the wild type and IL10Rα knockout MAC-T cell lines, and less difference in immune response between infected and not infected IL10Rα knockout MAC-T cells, indicating IL10Rα plays an important role in the progression of MAP infection. Additionally, these comparisons allowed us to identify other genes involved in inflammation-mediated chemokine and cytokine signalling, interleukin signalling and toll-like receptor pathways.
Identifying differentially expressed genes in wild type and ILR10α knockout MAC-T cells infected with live MAP bacteria provided further evidence that IL10Rα contributes to mounting an immune response to MAP infection and allowed us to identify additional potential candidate genes involved in this process. We found there was a complex immune response during MAP infection that is controlled by many genes.
约内氏病是由副结核分枝杆菌(MAP)引起的一种慢性消耗性疾病。约内氏病具有高度传染性,奶牛感染MAP最终可能导致死亡。由于约内氏病尚无有效治疗方法,基因选择和管理措施的改进有助于降低其发病率。在先前的一项研究中,编码白细胞介素-10受体亚基α(IL10Rα)的基因与奶牛的约内氏病有关。我们的目标是通过研究活MAP攻击对使用CRISPR/cas9敲除IL10Rα的乳腺上皮细胞系(MAC-T)的影响,来确定IL10Rα如何影响MAP的发病机制。将野生型和IL10Rα敲除的MAC-T细胞系暴露于活MAP细菌72小时。此后,从感染和未感染的细胞中提取mRNA。比较野生型和IL10Rα敲除细胞系之间差异表达的基因。基于差异表达的基因进行基因本体分析,以确定涉及哪些生物学途径。
针对免疫系统过程途径来确定IL10Rα对MAP感染反应的影响。野生型和IL10Rα敲除的MAC-T细胞系之间的免疫反应存在差异,而感染和未感染的IL10Rα敲除MAC-T细胞之间的免疫反应差异较小,表明IL10Rα在MAP感染的进展中起重要作用。此外,这些比较使我们能够鉴定出参与炎症介导的趋化因子和细胞因子信号传导、白细胞介素信号传导和Toll样受体途径的其他基因。
鉴定感染活MAP细菌的野生型和ILR10α敲除MAC-T细胞中差异表达的基因,进一步证明IL10Rα有助于对MAP感染产生免疫反应,并使我们能够鉴定出参与这一过程的其他潜在候选基因。我们发现MAP感染期间存在由许多基因控制的复杂免疫反应。