State Key Laboratory of Aridland Crop Science, Gansu Agricultural University, Lanzhou 730070, China.
College of Life Science and Technology, Gansu Agricultural University, Lanzhou 730070, China.
Int J Mol Sci. 2024 May 30;25(11):5994. doi: 10.3390/ijms25115994.
Potato ( L.) is a major global food crop, and oxidative stress can significantly impact its growth. Previous studies have shown that its resistance to oxidative stress is mainly related to transcription factors, post-translational modifications, and antioxidant enzymes in vivo, but the specific molecular mechanisms remain unclear. In this study, we analyzed the transcriptome data from potato leaves treated with HO and Methyl viologen (MV), and a control group, for 12 h. We enriched 8334 (CK vs. HO) and 4445 (CK vs. MV) differentially expressed genes (DEGs), respectively, and randomly selected 15 DEGs to verify the sequencing data by qRT-PCR. Gene ontology (GO) enrichment analysis showed that the DEGs were mainly concentrated in cellular components and related to molecular function, and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis indicated that most of the DEGs were related to metabolic pathways, plant hormone signal transduction, MAPK-signaling pathway, and plant-pathogen interactions. In addition, several candidate transcription factors, mainly including MYB, WRKY, and genes associated with Ca-mediated signal transduction, were also found to be differentially expressed. Among them, the plant hormone genes Soltu.DM.03G022780 and Soltu.DM.06G019360, the CNGC gene Soltu.DM.06G006320, the MYB transcription factors Soltu.DM.06G004450 and Soltu.DM.09G002130, and the WRKY transcription factor Soltu.DM.06G020440 were noticeably highly expressed, which indicates that these are likely to be the key genes in the regulation of oxidative stress tolerance. Overall, these findings lay the foundation for further studies on the molecular mechanisms of potato leaves in response to oxidative stress.
马铃薯(L.)是一种主要的全球粮食作物,氧化应激会对其生长产生重大影响。先前的研究表明,其对氧化应激的抗性主要与体内的转录因子、翻译后修饰和抗氧化酶有关,但具体的分子机制尚不清楚。在这项研究中,我们分析了马铃薯叶片在 HO 和 Methyl viologen(MV)处理 12 小时后与对照组的转录组数据。我们分别富集了 8334 个(CK vs. HO)和 4445 个(CK vs. MV)差异表达基因(DEGs),并随机选择 15 个 DEGs 通过 qRT-PCR 验证测序数据。基因本体(GO)富集分析表明,DEGs 主要集中在细胞成分上,并与分子功能有关;京都基因与基因组百科全书(KEGG)富集分析表明,大多数 DEGs 与代谢途径、植物激素信号转导、MAPK 信号通路和植物-病原体相互作用有关。此外,还发现了几个候选转录因子,主要包括 MYB、WRKY 和与 Ca 介导的信号转导相关的基因,它们也表现出差异表达。其中,植物激素基因 Soltu.DM.03G022780 和 Soltu.DM.06G019360、CNGC 基因 Soltu.DM.06G006320、MYB 转录因子 Soltu.DM.06G004450 和 Soltu.DM.09G002130 以及 WRKY 转录因子 Soltu.DM.06G020440 表达明显上调,这表明它们可能是调节马铃薯叶片对氧化应激耐性的关键基因。总的来说,这些发现为进一步研究马铃薯叶片对氧化应激的分子机制奠定了基础。