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非综合征性听力损失患者的全外显子组测序

Whole Exome Sequencing of Non-Syndromic Hearing Loss Patients.

作者信息

Naddafnia Hossein, Noormohammadi Zahra, Irani Shiva, Salahshoorifar Iman

机构信息

Department of Biology, Science and Research Branch, Islamic Azad University, Tehran, Iran.

出版信息

Iran J Public Health. 2024 Feb;53(2):453-461. doi: 10.18502/ijph.v53i2.14930.

Abstract

BACKGROUND

Hearing loss is the second most common disease after mental retardation in Iran. Autosomal recessive non-syndromic hearing loss (ARNSHL) is an extreme and highly heterogeneous disease, for which more than 70 genes have been identified. Considering the frequency of family marriage as well as the importance of ARNSHL in Iran, we evaluated the genetic factors involved in this type of deafness.

METHODS

We performed the whole exome sequencing (WES) of eight Iranian subjects with severe nonsyndromic hearing loss selected from 110 well-characterized subjects with non-syndromic hearing loss from 2017-2019. The patients with mutated and genes were excluded from the study.

RESULTS

The use of the whole exome sequencing method revealed 10 different mutations in 7 genes, including c.1234G>T), (c.45DelC, c.466T>C), (c.12528-2A>C, c.16226-16227insAGTC), (c.7454delG), (c.3570+2T>C), (c.992G>A), (c.2359G>T, c.2353A>C). Seven new variants were observed in seven families including (c.1234G>T), (c.45DelC), (c.12528-2A>C), (c.7454delG), (c.16226-16227insAGTC), (c.3570+2T>C).

CONCLUSION

The causal mutation of ARNSHL was found in all patients using the WES. Meta-analysis studies can help to identify common mutations causing deafness in any population to facilitate identification of carriers and subjects with deafness.

摘要

背景

听力损失是伊朗仅次于智力障碍的第二大常见疾病。常染色体隐性非综合征性听力损失(ARNSHL)是一种极为复杂且高度异质性的疾病,目前已鉴定出70多个相关基因。鉴于伊朗近亲结婚的频率以及ARNSHL的重要性,我们评估了导致此类耳聋的遗传因素。

方法

我们对2017年至2019年从110名特征明确的非综合征性听力损失患者中挑选出的8名重度非综合征性听力损失的伊朗患者进行了全外显子组测序(WES)。研究排除了携带 和 基因突变的患者。

结果

使用全外显子组测序方法在7个基因中发现了10种不同的突变,包括 (c.1234G>T)、 (c.45DelC,c.466T>C)、 (c.12528 - 2A>C,c.16226 - 16227insAGTC)、 (c.7454delG)、 (c.3570+2T>C)、 (c.992G>A)、 (c.2359G>T,c.2353A>C)。在7个家族中观察到7个新的变异,包括 (c.1234G>T)、 (c.45DelC)、 (c.12528 - 2A>C)、 (c.7454delG)、 (c.16226 - 16227insAGTC)、 (c.3570+2T>C)。

结论

通过WES在所有患者中发现了ARNSHL的致病突变。荟萃分析研究有助于识别导致任何人群耳聋的常见突变,以促进携带者和耳聋患者的识别。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef0b/11182469/b0705ef25238/IJPH-53-453-g001.jpg

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本文引用的文献

2
Genomic Landscape and Mutational Signatures of Deafness-Associated Genes.
Am J Hum Genet. 2018 Oct 4;103(4):484-497. doi: 10.1016/j.ajhg.2018.08.006. Epub 2018 Sep 20.
3
Characterising the spectrum of autosomal recessive hereditary hearing loss in Iran.
J Med Genet. 2015 Dec;52(12):823-9. doi: 10.1136/jmedgenet-2015-103389. Epub 2015 Oct 7.
5
Whole-exome sequencing efficiently detects rare mutations in autosomal recessive nonsyndromic hearing loss.
PLoS One. 2012;7(11):e50628. doi: 10.1371/journal.pone.0050628. Epub 2012 Nov 30.
7
A comprehensive study to determine heterogeneity of autosomal recessive nonsyndromic hearing loss in Iran.
Am J Med Genet A. 2012 Oct;158A(10):2485-92. doi: 10.1002/ajmg.a.35572. Epub 2012 Aug 17.
8
Disease gene identification strategies for exome sequencing.
Eur J Hum Genet. 2012 May;20(5):490-7. doi: 10.1038/ejhg.2011.258. Epub 2012 Jan 18.
9
Genetic causes of nonsyndromic hearing loss in Iran in comparison with other populations.
J Hum Genet. 2010 Oct;55(10):639-48. doi: 10.1038/jhg.2010.96. Epub 2010 Aug 26.

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