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通过重建葎草烯骨架合成包含中等大小环的萜类生物碱样化合物库。

Synthesis of a Library of Terpenoid Alkaloid-Like Compounds Containing Medium-Sized Rings via Reconstruction of the Humulene Skeleton.

机构信息

Faculty of Pharmacy, Keio University, 1-5-30 Shibakoen, 105-8512, Minato-ku, Tokyo, Japan.

Graduate School of Pharmaceutical Sciences, Tohoku University, 6-3 Aoba, 980-8578, Aramaki, Aoba-ku, Sendai, Japan.

出版信息

Chemistry. 2024 Aug 27;30(48):e202402082. doi: 10.1002/chem.202402082. Epub 2024 Aug 2.

Abstract

The construction of a chemical library based on natural products is a promising method for the synthesis of natural product-like compounds. In this study, we synthesized a terpenoid alkaloid-like compound library based on the humulene skeleton. Our strategy, which enables access to diverse ring systems such as 11-membered monocyclic, oxabicyclic, and medium-sized aza ring-containing scaffolds, involves the introduction of a nitrogen atom, an intermolecular C-O bond formation via Lewis acid-mediated epoxide-opening transannulation, and a ring-reconstruction strategy based on olefin metathesis. A cheminformatics analysis based on their structural and physicochemical properties revealed that the synthesized compounds have high three-dimensionality and high natural product likeness scores but with structural novelty. The usefulness of the terpenoid alkaloid-like compound library for drug discovery and the accessibility to structure-activity relationship studies were validated by performing an assay for osteoclast-specific tartrate-resistant acid phosphatase activity, resulting in the identification of a seed compound for bone-resorptive diseases such as osteoporosis.

摘要

基于天然产物的化学文库构建是合成类似天然产物化合物的一种很有前途的方法。在这项研究中,我们基于葎草烯骨架合成了一个萜类生物碱类似物文库。我们的策略能够引入氮原子、通过路易斯酸介导的环氧化物开环-transannulation 形成分子间 C-O 键,以及基于烯烃复分解的环重建策略,从而能够获得多样化的环系统,如 11 元单环、氧杂双环和中等大小的含氮杂环骨架。基于它们的结构和物理化学性质的化学信息学分析表明,合成的化合物具有高的三维性和高的天然产物相似度评分,但具有结构新颖性。通过进行抗酒石酸酸性磷酸酶活性测定来评估萜类生物碱类似物文库在药物发现中的用途和对构效关系研究的可及性,从而鉴定出一种针对骨质疏松症等骨吸收性疾病的种子化合物。

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