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包含缬氨酸蛋白(VCP)/ p97 寡聚化。

Valosin-Containing Protein (VCP)/p97 Oligomerization.

机构信息

School of Pharmaceutical Science, Hengyang Medical School, University of South China, Hengyang, China.

Borch Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, IN, USA.

出版信息

Subcell Biochem. 2024;104:485-501. doi: 10.1007/978-3-031-58843-3_18.

DOI:10.1007/978-3-031-58843-3_18
PMID:38963497
Abstract

Valosin-containing protein (VCP), also known as p97, is an evolutionarily conserved AAA+ ATPase essential for cellular homeostasis. Cooperating with different sets of cofactors, VCP is involved in multiple cellular processes through either the ubiquitin-proteasome system (UPS) or the autophagy/lysosomal route. Pathogenic mutations frequently found at the interface between the NTD domain and D1 ATPase domain have been shown to cause malfunction of VCP, leading to degenerative disorders including the inclusion body myopathy associated with Paget disease of bone and frontotemporal dementia (IBMPFD), amyotrophic lateral sclerosis (ALS), and cancers. Therefore, VCP has been considered as a potential therapeutic target for neurodegeneration and cancer. Most of previous studies found VCP predominantly exists and functions as a hexamer, which unfolds and extracts ubiquitinated substrates from protein complexes for degradation. However, recent studies have characterized a new VCP dodecameric state and revealed a controlling mechanism of VCP oligomeric states mediated by the D2 domain nucleotide occupancy. Here, we summarize our recent knowledge on VCP oligomerization, regulation, and potential implications of VCP in cellular function and pathogenic progression.

摘要

包含缬氨酸的蛋白(VCP),也被称为 p97,是一种进化上保守的 AAA+ATP 酶,对于细胞内环境的稳定至关重要。VCP 通过与不同的辅助因子结合,参与多种细胞过程,包括通过泛素-蛋白酶体系统(UPS)或自噬/溶酶体途径。在 NTD 结构域和 D1 ATP 酶结构域之间的界面上经常发现的致病性突变,已经表明会导致 VCP 的功能障碍,导致退行性疾病,包括与骨 Paget 病和额颞叶痴呆(IBMPFD)、肌萎缩侧索硬化症(ALS)和癌症相关的包涵体肌病。因此,VCP 已被认为是神经退行性疾病和癌症的潜在治疗靶点。大多数先前的研究发现,VCP 主要以六聚体的形式存在并发挥作用,它从蛋白质复合物中展开并提取泛素化的底物进行降解。然而,最近的研究已经描述了一种新的 VCP 十二聚体状态,并揭示了由 D2 结构域核苷酸占据介导的 VCP 寡聚状态的控制机制。在这里,我们总结了我们最近对 VCP 寡聚化、调节以及 VCP 在细胞功能和致病进展中的潜在作用的了解。

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Valosin-Containing Protein (VCP)/p97 Oligomerization.包含缬氨酸蛋白(VCP)/ p97 寡聚化。
Subcell Biochem. 2024;104:485-501. doi: 10.1007/978-3-031-58843-3_18.
2
Nucleocytoplasmic shuttling of valosin-containing protein (VCP/p97) regulated by its N domain and C-terminal region.含缬酪肽蛋白(VCP/p97)的核质穿梭受其N结构域和C末端区域调控。
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The heterozygous R155C VCP mutation: Toxic in humans! Harmless in mice?杂合 R155C VCP 突变:对人类有毒!对小鼠无害?
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Pathogenic VCP/TER94 alleles are dominant actives and contribute to neurodegeneration by altering cellular ATP level in a Drosophila IBMPFD model.致病 VCP/TER94 等位基因是显性激活物,通过改变果蝇 IBMPFD 模型中的细胞 ATP 水平导致神经退行性变。
PLoS Genet. 2011 Feb 3;7(2):e1001288. doi: 10.1371/journal.pgen.1001288.
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A unique IBMPFD-related P97/VCP mutation with differential binding pattern and subcellular localization.一种具有独特 IBMPFD 相关 P97/VCP 突变的蛋白,具有不同的结合模式和亚细胞定位。
Int J Biochem Cell Biol. 2013 Apr;45(4):773-82. doi: 10.1016/j.biocel.2013.01.006. Epub 2013 Jan 16.
6
Ubiquitin- and ATP-dependent unfoldase activity of P97/VCP•NPLOC4•UFD1L is enhanced by a mutation that causes multisystem proteinopathy.P97/VCP•NPLOC4•UFD1L 的泛素和 ATP 依赖性展开酶活性可被导致多系统蛋白病的突变增强。
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VCP/p97 is essential for maturation of ubiquitin-containing autophagosomes and this function is impaired by mutations that cause IBMPFD.VCP/p97 对于含有泛素的自噬体的成熟是必不可少的,而导致 IBMPFD 的突变会损害这一功能。
Autophagy. 2010 Feb;6(2):217-27. doi: 10.4161/auto.6.2.11014. Epub 2010 Feb 22.
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Inclusion body myopathy, Paget's disease of the bone and fronto-temporal dementia: a disorder of autophagy.包涵体肌病、骨 Paget 病和额颞叶痴呆:自噬相关疾病。
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Neuronal-specific overexpression of a mutant valosin-containing protein associated with IBMPFD promotes aberrant ubiquitin and TDP-43 accumulation and cognitive dysfunction in transgenic mice.神经元特异性过表达与 IBMPFD 相关的突变型含缬氨酸结合蛋白可促进转基因小鼠异常泛素和 TDP-43 积累及认知功能障碍。
Am J Pathol. 2013 Aug;183(2):504-15. doi: 10.1016/j.ajpath.2013.04.014. Epub 2013 Jun 5.
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IBMPFD Disease-Causing Mutant VCP/p97 Proteins Are Targets of Autophagic-Lysosomal Degradation.导致IBMPFD疾病的突变型VCP/p97蛋白是自噬溶酶体降解的靶点。
PLoS One. 2016 Oct 21;11(10):e0164864. doi: 10.1371/journal.pone.0164864. eCollection 2016.

引用本文的文献

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Proteomics analysis reveals the differential impact of the p97 inhibitor CB-5083 on protein levels in various cellular compartments of the HL-60 cell line.蛋白质组学分析揭示了p97抑制剂CB-5083对HL-60细胞系不同细胞区室中蛋白质水平的不同影响。
MicroPubl Biol. 2024 Nov 27;2024. doi: 10.17912/micropub.biology.001372. eCollection 2024.

本文引用的文献

1
Dodecamer assembly of a metazoan AAA chaperone couples substrate extraction to refolding.多聚体组装的后生动物 AAA 伴侣蛋白将底物提取与重折叠偶联。
Sci Adv. 2023 May 10;9(19):eadf5336. doi: 10.1126/sciadv.adf5336.
2
Comprehensive structural characterization of the human AAA+ disaggregase CLPB in the apo- and substrate-bound states reveals a unique mode of action driven by oligomerization.全面的结构表征揭示了人 AAA+解聚酶 CLPB 在apo 和底物结合状态下的独特作用模式,该模式由寡聚化驱动。
PLoS Biol. 2023 Feb 6;21(2):e3001987. doi: 10.1371/journal.pbio.3001987. eCollection 2023 Feb.
3
Inhibitors of the ATPase p97/VCP: From basic research to clinical applications.
ATP酶p97/VCP的抑制剂:从基础研究到临床应用
Cell Chem Biol. 2023 Jan 19;30(1):3-21. doi: 10.1016/j.chembiol.2022.12.007. Epub 2023 Jan 13.
4
PTP4A2 promotes lysophagy by dephosphorylation of VCP/p97 at Tyr805.PTP4A2 通过去磷酸化 VCP/p97 的 Tyr805 促进溶酶体自噬。
Autophagy. 2023 May;19(5):1562-1581. doi: 10.1080/15548627.2022.2140558. Epub 2022 Nov 7.
5
Cryo-EM structure of human hexameric MCM2-7 complex.人源六聚体MCM2-7复合物的冷冻电镜结构
iScience. 2022 Aug 17;25(9):104976. doi: 10.1016/j.isci.2022.104976. eCollection 2022 Sep 16.
6
Active conformation of the p97-p47 unfoldase complex.p97-p47 解折叠酶复合物的活性构象。
Nat Commun. 2022 May 12;13(1):2640. doi: 10.1038/s41467-022-30318-3.
7
Purification and cryo-EM structure determination of VCP/p97 dodecamers from mammalian and bacterial cells.从哺乳动物和细菌细胞中纯化和冷冻电镜结构测定 VCP/p97 十二聚体。
STAR Protoc. 2022 Apr 22;3(2):101339. doi: 10.1016/j.xpro.2022.101339. eCollection 2022 Jun 17.
8
Cryo-EM structure of dodecamer human p97 in complex with NMS-873 reveals S-G peptide plays critical role for D2 ring oligomerization.冷冻电镜结构的十二聚体人类 p97 与 NMS-873 复合物揭示 S-G 肽对 D2 环寡聚化起着关键作用。
Biochem Biophys Res Commun. 2022 Apr 23;601:146-152. doi: 10.1016/j.bbrc.2022.02.056. Epub 2022 Feb 24.
9
Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.人源p97双六聚体的冷冻电镜结构捕获了增强的ATP酶活性状态。
Cell Discov. 2022 Feb 22;8(1):19. doi: 10.1038/s41421-022-00379-1.
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iScience. 2021 Oct 16;24(11):103310. doi: 10.1016/j.isci.2021.103310. eCollection 2021 Nov 19.