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整合转录组和代谢组分析揭示拟环纹豹蛛对缺氧环境的分子响应。

Integrated transcriptome and metabolome analysis reveals the molecular responses of Pardosa pseudoannulata to hypoxic environments.

作者信息

Li Jinjin, Tang Yun-E, Lv Bo, Wang Juan, Wang Zhi, Song Qisheng

机构信息

College of Life Science, Hunan Normal University, Changsha, Hunan, 410006, China.

Division of Plant Sciences and Technology, University of Missouri, Columbia, MO, 65211, USA.

出版信息

BMC Zool. 2024 Jul 4;9(1):15. doi: 10.1186/s40850-024-00206-y.

Abstract

Terrestrial organisms are likely to face hypoxic stress during natural disasters such as floods or landslides, which can lead to inevitable hypoxic conditions for those commonly residing within soil. Pardosa pseudoannulata often inhabits soil crevices and has been extensively studied, yet research on its response to hypoxic stress remains unclear. Therefore, we investigated the adaptive strategies of Pardosa pseudoannulata under hypoxic stress using metabolomics and transcriptomics approaches. The results indicated that under hypoxic stress, metabolites related to energy and antioxidants such as ATP, D-glucose 6-phosphate, flavin adenine dinucleotide (FAD), and reduced L-glutathione were significantly differentially expressed. Pathways such as the citric acid (TCA) cycle and oxidative phosphorylation were significantly enriched. Transcriptome analysis and related assessments also revealed a significant enrichment of pathways associated with energy metabolism, suggesting that Pardosa pseudoannulata primarily copes with hypoxic environments by modulating energy metabolism and antioxidant-related substances.

摘要

陆生生物在洪水或山体滑坡等自然灾害期间可能会面临缺氧胁迫,这会给那些通常栖息在土壤中的生物带来不可避免的缺氧状况。拟环纹豹蛛(Pardosa pseudoannulata)常栖息于土壤缝隙中,且已得到广泛研究,但其对缺氧胁迫的反应研究仍不明确。因此,我们采用代谢组学和转录组学方法研究了拟环纹豹蛛在缺氧胁迫下的适应性策略。结果表明,在缺氧胁迫下,与能量和抗氧化剂相关的代谢物,如三磷酸腺苷(ATP)、6-磷酸-D-葡萄糖、黄素腺嘌呤二核苷酸(FAD)和还原型谷胱甘肽,均有显著差异表达。柠檬酸(TCA)循环和氧化磷酸化等途径显著富集。转录组分析及相关评估还揭示了与能量代谢相关途径的显著富集,这表明拟环纹豹蛛主要通过调节能量代谢和抗氧化相关物质来应对缺氧环境。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2c29/11225295/8efaabb5faa6/40850_2024_206_Fig1_HTML.jpg

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