Feng J Y, Zhou R F, Liu H W, Hu Z H, Wu F, Wang H T, Yue J H, Zhu Z N, Wu F
School of Public Health, Fudan University, Shanghai 200032, China.
Shanghai Municipal Center for Disease Control and Prevention, Shanghai 200336, China.
Zhonghua Liu Xing Bing Xue Za Zhi. 2024 Jul 10;45(7):932-940. doi: 10.3760/cma.j.cn112338-20240108-00009.
To explore the association between insulin resistance (IR) and genome-wide DNA methylation based on Shanghai twin study. Monozygotic twins (MZ) from Shanghai were recruited during 2012-2013, 2017-2018, and 2022-2023. Data were collected by questionnaire survey, physical examination and laboratory tests. Genome-wide DNA methylation was quantified. Generalized linear mixed effect model was applied to analyze the association between methylation level at each site and homeostatic model assessment 2-insulin resistance (HOMA2-IR). Non-paired and paired designs were used to assess the association between DNA methylation and phenotype of IR. Cluster analysis was conducted to identify the clusters of top significant sites. Generalized linear regression was performed to examine the differential methylation patterns from clusters. A total of 100 MZ pairs were included in this study. Hypermethylated cg10535199-2q23.1 (=0.74%, =1.51×10, =1.06, 95%: 1.03-1.09) and ch.17.49619327- (=0.23%, =7.54×10, =1.17, 95%: 1.08-1.28) were identified with suggestive significance. After correcting for multiple testing, no sites reached genome-wide significance. There was no statistical significance in the paired analysis. Two clusters with hypomethylated (=-0.39%, <0.001) and hypermethylated (=0.47%, <0.001) patterns were observed for HOMA2-IR. IR was significantly associated with DNA methylation, and genetic factors might contribute to the association.
基于上海双胞胎研究,探讨胰岛素抵抗(IR)与全基因组DNA甲基化之间的关联。在2012 - 2013年、2017 - 2018年和2022 - 2023年期间招募了来自上海的同卵双胞胎(MZ)。通过问卷调查、体格检查和实验室检测收集数据。对全基因组DNA甲基化进行定量分析。应用广义线性混合效应模型分析每个位点的甲基化水平与稳态模型评估2 - 胰岛素抵抗(HOMA2 - IR)之间的关联。采用非配对和配对设计评估DNA甲基化与IR表型之间的关联。进行聚类分析以识别高度显著位点的聚类。采用广义线性回归分析聚类中的差异甲基化模式。本研究共纳入100对MZ双胞胎。发现甲基化水平升高的cg10535199 - 2q23.1(=0.74%,=1.51×10,=1.06,95%置信区间:1.03 - 1.09)和ch.17.49619327 - (=0.23%,=7.54×10,=1.17,95%置信区间:1.08 - 1.28)具有提示性意义。在进行多重检验校正后,没有位点达到全基因组显著性水平。配对分析中无统计学意义。观察到HOMA2 - IR存在两个具有低甲基化(=-0.39%,<0.001)和高甲基化(=0.47%,<0.001)模式的聚类。IR与DNA甲基化显著相关,遗传因素可能促成了这种关联。