• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

眼镜蛇、珊瑚蛇及其近缘物种的新系统发育基因组推断与“走出亚洲”生物地理学

Novel phylogenomic inference and 'Out of Asia' biogeography of cobras, coral snakes and their allies.

作者信息

Weinell Jeffrey L, Burbrink Frank T, Das Sunandan, Brown Rafe M

机构信息

Department of Ecology and Evolutionary Biology and Biodiversity Institute, University of Kansas, 1345 Jayhawk Blvd, Lawrence, KS 66045, USA.

Department of Herpetology, American Museum of Natural History, 200 Central Park West, New York, NY 10024, USA.

出版信息

R Soc Open Sci. 2024 Aug 7;11(8):240064. doi: 10.1098/rsos.240064. eCollection 2024 Aug.

DOI:10.1098/rsos.240064
PMID:39113776
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11303032/
Abstract

Estimation of evolutionary relationships among lineages that rapidly diversified can be challenging, and, in such instances, inaccurate or unresolved phylogenetic estimates can lead to erroneous conclusions regarding historical geographical ranges of lineages. One example underscoring this issue has been the historical challenge posed by untangling the biogeographic origin of elapoid snakes, which includes numerous dangerously venomous species as well as species not known to be dangerous to humans. The worldwide distribution of this lineage makes it an ideal group for testing hypotheses related to historical faunal exchanges among the many continents and other landmasses occupied by contemporary elapoid species. We developed a novel suite of genomic resources, included worldwide sampling, and inferred a robust estimate of evolutionary relationships, which we leveraged to quantitatively estimate geographical range evolution through the deep-time history of this remarkable radiation. Our phylogenetic and biogeographical estimates of historical ranges definitively reject a lingering former 'Out of Africa' hypothesis and support an 'Out of Asia' scenario involving multiple faunal exchanges between Asia, Africa, Australasia, the Americas and Europe.

摘要

估计快速分化的谱系之间的进化关系可能具有挑战性,在这种情况下,不准确或未解决的系统发育估计可能会导致关于谱系历史地理范围的错误结论。突出这一问题的一个例子是解开眼镜蛇科蛇类生物地理起源所带来的历史挑战,该科包括许多剧毒物种以及对人类无害的物种。这一谱系的全球分布使其成为检验与当代眼镜蛇科物种所占据的众多大陆和其他陆地之间历史动物群交流相关假设的理想群体。我们开发了一套新的基因组资源,包括全球采样,并推断出进化关系的可靠估计,我们利用这一估计通过这一显著辐射的深层历史来定量估计地理范围的进化。我们对历史范围的系统发育和生物地理估计明确拒绝了长期存在的“走出非洲”假说,并支持“走出亚洲”的情景,该情景涉及亚洲、非洲、澳大拉西亚、美洲和欧洲之间的多次动物群交流。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2435/11303032/80c5aa5e3a9b/rsos.240064.f004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2435/11303032/7ccabec9190e/rsos.240064.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2435/11303032/4e44cb33c4e5/rsos.240064.f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2435/11303032/ed4a7f5f258e/rsos.240064.f003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2435/11303032/80c5aa5e3a9b/rsos.240064.f004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2435/11303032/7ccabec9190e/rsos.240064.f001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2435/11303032/4e44cb33c4e5/rsos.240064.f002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2435/11303032/ed4a7f5f258e/rsos.240064.f003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2435/11303032/80c5aa5e3a9b/rsos.240064.f004.jpg

相似文献

1
Novel phylogenomic inference and 'Out of Asia' biogeography of cobras, coral snakes and their allies.眼镜蛇、珊瑚蛇及其近缘物种的新系统发育基因组推断与“走出亚洲”生物地理学
R Soc Open Sci. 2024 Aug 7;11(8):240064. doi: 10.1098/rsos.240064. eCollection 2024 Aug.
2
Ultraconserved elements-based phylogenomic systematics of the snake superfamily Elapoidea, with the description of a new Afro-Asian family.基于超保守元件的蛇超科 Elapoidea 系统发生学研究,包括一个新的非洲-亚洲蛇科的描述。
Mol Phylogenet Evol. 2023 Mar;180:107700. doi: 10.1016/j.ympev.2022.107700. Epub 2023 Jan 2.
3
Historical biogeography resolves the origins of endemic Arabian toad lineages (Anura: Bufonidae): Evidence for ancient vicariance and dispersal events with the Horn of Africa and South Asia.历史生物地理学解析了阿拉伯特有蟾蜍谱系(无尾目:蟾蜍科)的起源:与非洲之角和南亚古代隔离和扩散事件的证据。
BMC Evol Biol. 2015 Aug 6;15:152. doi: 10.1186/s12862-015-0417-y.
4
Phylogeny, biogeography and classification of the snake superfamily Elapoidea: a rapid radiation in the late Eocene.眼镜蛇超科的系统发育、生物地理学与分类:始新世晚期的快速辐射分化
Cladistics. 2009 Feb;25(1):38-63. doi: 10.1111/j.1096-0031.2008.00237.x. Epub 2009 Jan 5.
5
Multilocus phylogeny and statistical biogeography clarify the evolutionary history of major lineages of turtles.多位点系统发育和统计生物地理学阐明了龟类主要谱系的进化历史。
Mol Phylogenet Evol. 2017 Aug;113:59-66. doi: 10.1016/j.ympev.2017.05.008. Epub 2017 May 10.
6
Molecular phylogeny, divergence time estimates and historical biogeography within one of the world's largest monocot genera.世界上最大的单子叶植物属之一的分子系统发育、分歧时间估计和历史生物地理学。
AoB Plants. 2016 Aug 8;8. doi: 10.1093/aobpla/plw041. Print 2016.
7
Plastid phylogenomics and biogeographic analysis support a trans-Tethyan origin and rapid early radiation of Cornales in the Mid-Cretaceous.质体系统发育基因组学和生物地理学分析支持被子植物核心类群之一的木兰目在中白垩世起源于特提斯并快速辐射演化。
Mol Phylogenet Evol. 2019 Nov;140:106601. doi: 10.1016/j.ympev.2019.106601. Epub 2019 Aug 21.
8
Discovery of an old, archipelago-wide, endemic radiation of Philippine snakes.发现菲律宾蛇的古老、全岛范围的特有辐射。
Mol Phylogenet Evol. 2018 Feb;119:144-150. doi: 10.1016/j.ympev.2017.11.004. Epub 2017 Nov 21.
9
Phylogenomics of Psammodynastes and Buhoma (Elapoidea: Serpentes), with the description of a new Asian snake family.砂蟒属和布氏游蛇属(眼镜蛇超科:蛇亚目)的系统发育基因组学,兼对一个新的亚洲蛇科的描述
Sci Rep. 2024 Apr 25;14(1):9489. doi: 10.1038/s41598-024-60215-2.
10
Phylogeny, character evolution and historical biogeography of Scurrulinae (Loranthaceae): new insights into the circumscription of the genus Taxillus.Scurrulinae(桑寄生科)的系统发育、性状演化和历史生物地理学:对 Taxillus 属范围的新认识。
BMC Plant Biol. 2024 May 22;24(1):440. doi: 10.1186/s12870-024-05126-0.

引用本文的文献

1
Why Are Some Snakes More Terrifying and What Is Behind the Fear?为什么有些蛇更令人恐惧,恐惧背后的原因是什么?
Animals (Basel). 2025 Mar 4;15(5):731. doi: 10.3390/ani15050731.

本文引用的文献

1
Frog phylogeny: A time-calibrated, species-level tree based on hundreds of loci and 5,242 species.蛙类系统发育:基于数百个基因座和5242个物种构建的时间校准物种水平树。
Mol Phylogenet Evol. 2023 Nov;188:107907. doi: 10.1016/j.ympev.2023.107907. Epub 2023 Aug 25.
2
Paleoenvironments shaped the exchange of terrestrial vertebrates across Wallace's Line.古环境塑造了华莱士线两侧陆地脊椎动物的交流。
Science. 2023 Jul 7;381(6653):86-92. doi: 10.1126/science.adf7122. Epub 2023 Jul 6.
3
The phylogenomic and biogeographic history of the gartersnakes, watersnakes, and allies (Natricidae: Thamnophiini).
束带蛇、水蛇及其近缘蛇类(游蛇科:水游蛇属)的系统基因组学和生物地理学历史。
Mol Phylogenet Evol. 2023 Sep;186:107844. doi: 10.1016/j.ympev.2023.107844. Epub 2023 Jun 9.
4
Widespread reticulate evolution in an adaptive radiation.适应性辐射中的广泛网状进化。
Evolution. 2023 Apr 1;77(4):931-945. doi: 10.1093/evolut/qpad011.
5
Ancient DNA elucidates the lost world of western Indian Ocean giant tortoises and reveals a new extinct species from Madagascar.古 DNA 揭示了印度洋西部巨型陆龟的失落世界,并揭示了马达加斯加的一个新灭绝物种。
Sci Adv. 2023 Jan 13;9(2):eabq2574. doi: 10.1126/sciadv.abq2574. Epub 2023 Jan 11.
6
Ultraconserved elements-based phylogenomic systematics of the snake superfamily Elapoidea, with the description of a new Afro-Asian family.基于超保守元件的蛇超科 Elapoidea 系统发生学研究,包括一个新的非洲-亚洲蛇科的描述。
Mol Phylogenet Evol. 2023 Mar;180:107700. doi: 10.1016/j.ympev.2022.107700. Epub 2023 Jan 2.
7
The Bering Strait was flooded 10,000 years before the Last Glacial Maximum.白令海峡在末次冰盛期之前 10000 年就已被淹没。
Proc Natl Acad Sci U S A. 2023 Jan 3;120(1):e2206742119. doi: 10.1073/pnas.2206742119. Epub 2022 Dec 27.
8
The chemistry of snake venom and its medicinal potential.蛇毒的化学性质及其药用潜力。
Nat Rev Chem. 2022;6(7):451-469. doi: 10.1038/s41570-022-00393-7. Epub 2022 Jun 10.
9
Candidate-species delimitation in salamanders reveals gene flow across lineage boundaries, confounding phylogenetic estimation and clarifying hybrid zones.蝾螈的候选物种界定揭示了跨谱系边界的基因流动,这混淆了系统发育估计并明确了杂交区域。
Ecol Evol. 2022 Feb 16;12(2):e8574. doi: 10.1002/ece3.8574. eCollection 2022 Feb.
10
First occurrence of Psammophis (Serpentes) from Europe witnesses another Messinian herpetofaunal dispersal from Africa - biogeographic implications and a discussion of the vertebral morphology of psammophiid snakes.欧洲首次出现沙蟒(蛇类)见证了非洲又一次的 Messinian 爬行动物扩散 - 生物地理意义及对沙蟒蛇类脊椎形态的讨论。
Anat Rec (Hoboken). 2022 Nov;305(11):3263-3282. doi: 10.1002/ar.24892. Epub 2022 Feb 22.