Institute of Biochemistry, Justus-Liebig University Giessen, Giessen, Germany.
Department of Chemistry and Biochemistry, University of Zagreb Faculty of Food Technology and Biotechnology, Zagreb, Croatia.
Nat Commun. 2024 Aug 9;15(1):6829. doi: 10.1038/s41467-024-51035-z.
mRNA biogenesis in the eukaryotic nucleus is a highly complex process. The numerous RNA processing steps are tightly coordinated to ensure that only fully processed transcripts are released from chromatin for export from the nucleus. Here, we present the hypothesis that fission yeast Dbp2, a ribonucleoprotein complex (RNP) remodelling ATPase of the DEAD-box family, is the key enzyme in an RNP assembly checkpoint at the 3'-end of genes. We show that Dbp2 interacts with the cleavage and polyadenylation complex (CPAC) and localises to cleavage bodies, which are enriched for 3'-end processing factors and proteins involved in nuclear RNA surveillance. Upon loss of Dbp2, 3'-processed, polyadenylated RNAs accumulate on chromatin and in cleavage bodies, and CPAC components are depleted from the soluble pool. Under these conditions, cells display an increased likelihood to skip polyadenylation sites and a delayed transcription termination, suggesting that levels of free CPAC components are insufficient to maintain normal levels of 3'-end processing. Our data support a model in which Dbp2 is the active component of an mRNP remodelling checkpoint that licenses RNA export and is coupled to CPAC release.
真核细胞核中 mRNA 的生物发生是一个高度复杂的过程。众多的 RNA 加工步骤被紧密协调,以确保只有完全加工的转录本从染色质中释放出来,以便从核内输出。在这里,我们提出假说,裂殖酵母 Dbp2 是 DEAD 盒家族的核糖核蛋白复合物(RNP)重塑 ATP 酶,是基因 3'末端 RNP 组装检查点的关键酶。我们表明 Dbp2 与切割和多聚腺苷酸化复合物(CPAC)相互作用,并定位于切割体,其富含 3'端加工因子和参与核 RNA 监测的蛋白质。当 Dbp2 缺失时,3'加工的多聚腺苷酸化 RNA 在染色质和切割体上积累,并且 CPAC 成分从可溶性池中耗尽。在这些条件下,细胞显示出增加跳过多聚腺苷酸化位点和转录终止延迟的可能性,表明游离 CPAC 成分的水平不足以维持正常的 3'端加工水平。我们的数据支持这样一种模型,即 Dbp2 是一个 mRNP 重塑检查点的活性成分,该检查点可许可 RNA 输出,并与 CPAC 释放偶联。