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藻酸盐结合增强了噬菌体溶菌素部分折叠构象的结构稳定性并增强了其溶细胞活性。

Alginate binding enhances the structural stability and potentiates the lytic activity of bacteriophage endolysin's partially folded conformation.

机构信息

Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee-247667, Uttarakhand, India.

Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee-247667, Uttarakhand, India; Centre for Nanotechnology, Indian Institute of Technology Roorkee, Roorkee-247667, Uttarakhand, India.

出版信息

Arch Biochem Biophys. 2024 Oct;760:110129. doi: 10.1016/j.abb.2024.110129. Epub 2024 Aug 17.

DOI:10.1016/j.abb.2024.110129
PMID:39159898
Abstract

Polysaccharide polymers are increasingly being used as chaperon-like macromolecules in assisting protein folding of unfolded protein molecules. They interact with unfolded or partially folded proteins in a charge and conformation specific manner that results in the formation of stable protein-polysaccharide complexes. In most of the cases, the complex formation of protein-polysaccharide is driven via non-covalent interactions that have found to endorse the activity of proteins. T4L (18.7 kDa) and T7L (17 kDa) endolysins belong to the hydrolase and amidase class of peptidoglycan degrading enzymes. Both T4L and T7L exist in partially folded forms and are devoid of lytic activity at low pH conditions. In the current study, we assessed the binding of alginate with T4L and T7L at pH 7 and 3 using variety of biophysical and biochemical techniques. Spectroscopic studies revealed differential structural modulations of partially folded T4L and T7L upon their interaction with alginate. Further, the complex formation of alginate with partially folded T4L/T7L was confirmed by ITC and STEM. Additionally, the formed complexes of alginate with both T4L/T7L PF endolysins were found to be chemically and enzymatically stable. Moreover, such complexes were also marked with differential enhancement in their lytic activities at acidic pH conditions. This implied the potency of alginate as an excellent choice of matrix to preserve the structural and functional integrity of partially folded forms of T4L and T7L at highly acidic conditions.

摘要

多糖聚合物越来越多地被用作类似伴侣的大分子,以协助未折叠蛋白质分子的折叠。它们以特定的电荷和构象与未折叠或部分折叠的蛋白质相互作用,导致形成稳定的蛋白质-多糖复合物。在大多数情况下,蛋白质-多糖复合物的形成是通过非共价相互作用驱动的,这些相互作用被发现可以增强蛋白质的活性。T4L(18.7 kDa)和 T7L(17 kDa)内切溶菌酶属于水解酶和酰胺酶类肽聚糖降解酶。T4L 和 T7L 均以部分折叠的形式存在,在低 pH 条件下缺乏溶菌活性。在当前的研究中,我们使用各种生物物理和生化技术评估了在 pH 7 和 3 时藻酸盐与 T4L 和 T7L 的结合。光谱研究表明,藻酸盐与部分折叠的 T4L 和 T7L 相互作用时,其结构发生了不同的调制。此外,通过 ITC 和 STEM 证实了藻酸盐与部分折叠的 T4L/T7L 的复合物形成。此外,与 T4L/T7L PF 内切溶菌酶形成的复合物在化学和酶学上都是稳定的。此外,这些复合物在酸性 pH 条件下的溶菌活性也有明显增强。这表明藻酸盐是一种很好的选择,可以在高度酸性条件下保持 T4L 和 T7L 部分折叠形式的结构和功能完整性。

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