Wang Xiao-Xia, Deng Bei-Qian, Ouyang Zhi-Qiu, Yan Yang, Lv Jian-Ming, Qin Sheng-Ying, Hu Dan, Chen Guo-Dong, Yao Xin-Sheng, Gao Hao
Institute of Traditional Chinese Medicine & Natural Products, College of Pharmacy/State Key Laboratory of Bioactive Molecules and Druggability Assessment/International Cooperative Laboratory of Traditional Chinese Medicine Modernization and Innovative Drug Development of Ministry of Education (MOE) of China/Guangdong Province Key Laboratory of Pharmacodynamic Constituents of TCM and New Drugs Research, Jinan University, Guangzhou 510632, China.
Clinical Experimental Center, First Affiliated Hospital of Jinan University, Guangzhou 510630, China.
J Nat Prod. 2024 Sep 27;87(9):2139-2147. doi: 10.1021/acs.jnatprod.4c00035. Epub 2024 Aug 28.
-Quinone methides (-QMs) are a class of highly reactive intermediates that serve as important nonisolable building blocks (NBBs) in organic synthesis and small-molecule library construction. Because of their instability and nonisolability, most reported -QMs are generated through chemical synthesis, and only a few natural -QMs have been reported due to the lack of directed discovery strategies. Herein, a new natural -QM precursor (trichophenol A, ) was identified from the fungal strain of sp. AT0167 through genome mining, which was generated by (nonreducing polyketide synthase) and (2-oxoglutarate dependent dioxygenase). Combinatorial biosynthesis via two other known NRPKS genes with and was performed, leading to the generation of five new trichophenol -QM oligomers (trichophenols D-H, -). The strategy combining genome mining with combinatorial biosynthesis not only targetedly uncovered a new natural -QM precursor but also produced various new molecules through oligomerization of the new -QM and its designated -QM acceptors without chemical synthesis and isolation of intermediates, which was named NBB genome mining-combinatorial biosynthesis strategy for -QM molecule library construction. This study provides a new strategy for the targeted discovery of natural -QMs and small-molecule library construction with natural -QMs.
醌甲基化物(-QMs)是一类高反应性中间体,在有机合成和小分子文库构建中作为重要的不可分离的结构单元(NBBs)。由于其不稳定性和不可分离性,大多数已报道的-QMs是通过化学合成产生的,由于缺乏定向发现策略,仅有少数天然-QMs被报道。在此,通过基因组挖掘从真菌菌株sp. AT0167中鉴定出一种新的天然-QM前体(三苯酚A),它由(非还原聚酮合酶)和(2-氧代戊二酸依赖性双加氧酶)产生。通过另外两个已知的NRPKS基因与和进行组合生物合成,产生了五种新的三苯酚-QM低聚物(三苯酚D-H,-)。将基因组挖掘与组合生物合成相结合的策略不仅有针对性地发现了一种新的天然-QM前体,还通过新-QM及其指定的-QM受体的低聚反应产生了各种新分子,无需化学合成和中间体分离,这被命名为用于-QM分子文库构建的NBB基因组挖掘-组合生物合成策略。本研究为天然-QMs的定向发现以及利用天然-QMs构建小分子文库提供了一种新策略。