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同时表达四个和八个多重向导 RNA 和 Cas9 尼克酶的一体式腺病毒载体的构建和稳定性。

Construction and Stability of All-in-One Adenovirus Vectors Simultaneously Expressing Four and Eight Multiplex Guide RNAs and Cas9 Nickase.

机构信息

Department of Immune Medicine, National Cancer Center Research Institute, Tokyo 104-0045, Japan.

Laboratory of Virology, Institute of Microbial Chemistry (BIKAKEN), Microbial Chemistry Foundation, Shinagawa-ku, Tokyo 141-0021, Japan.

出版信息

Int J Mol Sci. 2024 Aug 12;25(16):8783. doi: 10.3390/ijms25168783.

Abstract

CRISPR/Cas9 technology is expected to offer novel genome editing-related therapies for various diseases. We previously showed that an adenovirus vector (AdV) possessing eight expression units of multiplex guide RNAs (gRNAs) was obtained with no deletion of these units. Here, we attempted to construct "all-in-one" AdVs possessing expression units of four and eight gRNAs with Cas9 nickase, although we expected obstacles to obtain complete all-in-one AdVs. The first expected obstacle was that extremely high copies of viral genomes during replication may cause severe off-target cleavages of host cells and induce homologous recombination. However, surprisingly, four units in the all-in-one AdV genome were maintained completely intact. Second, for the all-in-one AdV containing eight gRNA units, we enlarged the E3 deletion in the vector backbone and shortened the U6 promoter of the gRNA expression units to shorten the AdV genome within the adenovirus packaging limits. The final size of the all-in-one AdV genome containing eight gRNA units still slightly exceeded the reported upper limit. Nevertheless, approximately one-third of the eight units remained intact, even upon preparation for in vivo experiments. Third, the genome editing efficiency unexpectedly decreased upon enlarging the E3 deletion. Our results suggested that complete all-in-one AdVs containing four gRNA units could be obtained if the problem of the low genome editing efficiency is solved, and those containing even eight gRNA units could be obtained if the obstacle of the vector size is also removed.

摘要

CRISPR/Cas9 技术有望为各种疾病提供新型的与基因组编辑相关的治疗方法。我们之前曾表明,获得了一种具有八个多重向导 RNA(gRNA)表达单元的腺病毒载体(AdV),而这些单元没有缺失。在这里,我们试图构建具有 Cas9 切口酶的四个和八个 gRNA 表达单元的“一体式”AdV,尽管我们预计获得完整的一体式 AdV 会存在障碍。第一个预期的障碍是,在复制过程中病毒基因组的极高拷贝数可能导致宿主细胞的严重非靶向切割,并诱导同源重组。然而,令人惊讶的是,一体式 AdV 基因组中的四个单元完全保持完整。其次,对于含有八个 gRNA 单元的一体式 AdV,我们扩大了载体骨架中的 E3 缺失,并缩短了 gRNA 表达单元的 U6 启动子,以缩短腺病毒包装限制内的 AdV 基因组。含有八个 gRNA 单元的一体式 AdV 基因组的最终大小仍然略高于报道的上限。尽管如此,在准备体内实验时,大约三分之一的八个单元仍然保持完整。第三,扩大 E3 缺失会导致基因组编辑效率意外降低。我们的结果表明,如果解决了低基因组编辑效率的问题,就可以获得包含四个 gRNA 单元的完整一体式 AdV,而如果消除了载体大小的障碍,也可以获得包含甚至八个 gRNA 单元的一体式 AdV。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d005/11354445/bed6cb209594/ijms-25-08783-g001.jpg

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