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典型温带森林中蚯蚓皮肤、肠道及栖息地土壤细菌群落结构的比较分析

Comparative Analysis of Bacterial Community Structures in Earthworm Skin, Gut, and Habitat Soil across Typical Temperate Forests.

作者信息

Wang Kang, Yuan Ning, Zhou Jia, Ni Hongwei

机构信息

School of Geographical Sciences, Harbin Normal University, Harbin 150025, China.

Heilongjiang Academy of Forestry, Harbin 150081, China.

出版信息

Microorganisms. 2024 Aug 14;12(8):1673. doi: 10.3390/microorganisms12081673.

DOI:10.3390/microorganisms12081673
PMID:39203516
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11357350/
Abstract

Earthworms are essential components in temperate forest ecosystems, yet the patterns of change in earthworm-associated microbial communities across different temperate forests remain unclear. This study employed high-throughput sequencing technology to compare bacterial community composition and structure in three earthworm-associated microhabitats (skin, gut, and habitat soil) across three typical temperate forests in China, and investigated the influence of environmental factors on these differential patterns. The results indicate that: (1) From warm temperate forests to cold temperate forests, the soil pH of the habitat decreased significantly. In contrast, the physicochemical properties of earthworm skin mucus exhibited different trends compared to those of the habitat soil. (2) Alpha diversity analysis revealed a declining trend in Shannon indices across all three microhabitats. (3) Beta diversity analysis revealed that the transition from warm temperate deciduous broad-leaved forest to cold temperate coniferous forest exerted the most significant impact on the gut bacterial communities of earthworms, while its influence on the skin bacterial communities was comparatively less pronounced. (4) and were the predominant phyla in earthworm skin, gut, and habitat soil, but the trends in bacterial community composition differed among the three microhabitats. (5) Mantel tests revealed significant correlations between bacterial community structures and climatic factors, physicochemical properties of earthworm habitat soil, and physicochemical properties of earthworm skin mucus. The findings of this study offer novel perspectives on the interplay between earthworms, microorganisms, and the environment within forest ecosystems.

摘要

蚯蚓是温带森林生态系统的重要组成部分,但不同温带森林中与蚯蚓相关的微生物群落的变化模式仍不明确。本研究采用高通量测序技术,比较了中国三种典型温带森林中三个与蚯蚓相关的微生境(皮肤、肠道和栖息地土壤)中的细菌群落组成和结构,并研究了环境因素对这些差异模式的影响。结果表明:(1)从暖温带森林到寒温带森林,栖息地的土壤pH值显著下降。相比之下,蚯蚓皮肤黏液的理化性质与栖息地土壤呈现出不同的趋势。(2)α多样性分析表明,所有三个微生境中的香农指数均呈下降趋势。(3)β多样性分析表明,从暖温带落叶阔叶林向寒温带针叶林的转变对蚯蚓肠道细菌群落的影响最为显著,而对皮肤细菌群落的影响相对较小。(4) 和 是蚯蚓皮肤、肠道和栖息地土壤中的优势门类,但三个微生境中细菌群落组成的趋势有所不同。(5)Mantel检验表明,细菌群落结构与气候因素、蚯蚓栖息地土壤的理化性质以及蚯蚓皮肤黏液的理化性质之间存在显著相关性。本研究结果为森林生态系统中蚯蚓、微生物和环境之间的相互作用提供了新的视角。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/a0fd6600e899/microorganisms-12-01673-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/5400c771853d/microorganisms-12-01673-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/68b11fd2d770/microorganisms-12-01673-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/0278691b2f8e/microorganisms-12-01673-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/69cf585768fc/microorganisms-12-01673-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/cd9e2c16088b/microorganisms-12-01673-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/91fa67512de5/microorganisms-12-01673-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/5540e773ed40/microorganisms-12-01673-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/2f34bf1a9a1a/microorganisms-12-01673-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/a0fd6600e899/microorganisms-12-01673-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/5400c771853d/microorganisms-12-01673-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/68b11fd2d770/microorganisms-12-01673-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/0278691b2f8e/microorganisms-12-01673-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/69cf585768fc/microorganisms-12-01673-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/cd9e2c16088b/microorganisms-12-01673-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/91fa67512de5/microorganisms-12-01673-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/5540e773ed40/microorganisms-12-01673-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/2f34bf1a9a1a/microorganisms-12-01673-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/03d1/11357350/a0fd6600e899/microorganisms-12-01673-g009.jpg

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本文引用的文献

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Bacterial dispersal enhances the elimination of active fecal coliforms during vermicomposting of fruit and vegetable wastes: The overlooked role of earthworm mucus.细菌的扩散增强了在果蔬废物堆肥过程中对活性粪大肠菌群的消除:蚯蚓黏液的被忽视的作用。
J Hazard Mater. 2024 Jun 5;471:134280. doi: 10.1016/j.jhazmat.2024.134280. Epub 2024 Apr 15.
2
Earthworms and plants can decrease soil greenhouse gas emissions by modulating soil moisture fluctuations and soil macroporosity in a mesocosm experiment.在一项中观实验中,蚯蚓和植物可以通过调节土壤水分波动和土壤大孔来减少土壤温室气体排放。
PLoS One. 2024 Feb 15;19(2):e0289859. doi: 10.1371/journal.pone.0289859. eCollection 2024.
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Invasive earthworms shift soil microbial community structure in northern North American forest ecosystems.
入侵蚯蚓改变了北美北部森林生态系统中的土壤微生物群落结构。
iScience. 2024 Jan 12;27(2):108889. doi: 10.1016/j.isci.2024.108889. eCollection 2024 Feb 16.
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Compositional changes and ecological characteristics of earthworm mucus under different electrical stimuli.不同电刺激下蚯蚓粘液的组成变化及生态特征。
Sci Rep. 2023 Feb 9;13(1):2332. doi: 10.1038/s41598-023-29125-7.
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Deciphering roles of microbiota in arsenic biotransformation from the earthworm gut and skin.解析土壤和皮肤中微生物菌群在砷生物转化中的作用。
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Carbendazim shapes microbiome and enhances resistome in the earthworm gut.苯菌灵重塑土壤蚯蚓肠道微生物组并增强其抗药性基因库。
Microbiome. 2022 Apr 18;10(1):63. doi: 10.1186/s40168-022-01261-8.
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Effects of Three Pesticides on the Earthworm Gut Microbiota.三种农药对蚯蚓肠道微生物群的影响。
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