Biological/Pharmacological Research Laboratories, Takatsuki Research Center, Central Pharmaceutical Research Institute, Japan Tobacco Inc, Osaka, Japan.
Physiol Res. 2024 Aug 31;73(4):593-608. doi: 10.33549/physiolres.935237.
Nonalcoholic fatty liver disease (NAFLD) is a chronic liver disease characterized by the accumulation of fat in the liver in the absence of excessive alcohol consumption or a secondary cause of hepatic steatosis. The prevalence of NAFLD is increasing worldwide and its management has become a public health concern. Animal models are traditionally used to elucidate disease mechanisms and identify potential drug targets; however, their translational aspects in human diseases have not been fully established. This study aimed to clarify the utility of animal models for translational research by assessing their relevance to human diseases using gene expression analysis. Weighted gene co-expression network analysis of liver tissues from Western diet (WD)-induced NAFLD mice was performed to identify the modules associated with disease progression. Moreover, the similarity of the gene co-expression network across species was evaluated using module preservation analysis. Nineteen disease-associated modules were identified. The brown module was positively associated with disease severity, and functional analyses indicated that it may be involved in inflammatory responses in immune cells. Moreover, the gene co-expression network of the brown module was highly preserved in human NAFLD liver gene expression datasets. These results indicate that WD-induced NAFLD mice have similar gene co-expression networks (especially genes associated with inflammatory responses) to humans and are thought to be a useful experimental tool for preclinical research on NAFLD. Keywords: Nonalcoholic fatty liver disease (NAFLD), Weighted gene co-expression network analysis (WGCNA), Western diet (WD).
非酒精性脂肪性肝病(NAFLD)是一种慢性肝病,其特征是在没有过量饮酒或肝脂肪变性的继发原因的情况下,肝脏脂肪积聚。NAFLD 的患病率在全球范围内正在增加,其管理已成为公共卫生关注的焦点。传统上,动物模型用于阐明疾病机制并确定潜在的药物靶点;然而,它们在人类疾病中的转化方面尚未得到充分确立。本研究旨在通过使用基因表达分析评估其与人类疾病的相关性,阐明动物模型在转化研究中的应用。对西方饮食(WD)诱导的 NAFLD 小鼠的肝组织进行加权基因共表达网络分析,以确定与疾病进展相关的模块。此外,还通过模块保存分析评估了跨物种的基因共表达网络的相似性。确定了 19 个与疾病相关的模块。棕色模块与疾病严重程度呈正相关,功能分析表明其可能参与免疫细胞中的炎症反应。此外,人类 NAFLD 肝脏基因表达数据集高度保存了棕色模块的基因共表达网络。这些结果表明,WD 诱导的 NAFLD 小鼠与人类具有相似的基因共表达网络(尤其是与炎症反应相关的基因),被认为是 NAFLD 临床前研究的有用实验工具。关键词:非酒精性脂肪性肝病(NAFLD)、加权基因共表达网络分析(WGCNA)、西方饮食(WD)。