Zal Niloufar, Safi Sare, Ahmadieh Hamid, Fekri Sahba, Najafi Sajad, Forouhari Ali, Moghaddasi Afrooz, Hejazi Majd, Kheiri Bahareh, Eslami Maryam, Suri Fatemeh
Ocular Tissue Engineering Research Center, Research Institute for Ophthalmology and Vision Science, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Ophthalmic Epidemiology Research Center, Research Institute for Ophthalmology and Vision Science, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
J Curr Ophthalmol. 2024 Aug 10;35(4):355-361. doi: 10.4103/joco.joco_287_22. eCollection 2023 Oct-Dec.
To assess the possible association between MIR200B variations and sight-threatening diabetic retinopathy (STDR).
A total number of 141 diabetes mellitus patients were enrolled in the study and divided into two groups including 76 patients diagnosed with STDR assigned to the case group, and 65 subjects without STDR considered in the control group. Peripheral blood specimens were used to extract the DNA content, and the primary MIR200B encoding sequence was amplified using a polymerase chain reaction. Then, the amplified DNA was sequenced by the Sanger method. The sequences were compared to the MIR200B reference sequence to find sequence variations. RNAfold, miRVaS, and Mfold bioinformatics web servers were employed to predict the potential effects of the identified variations on RNA structure.
Two MIR200B gene variants were identified. Although both variations were found more frequent in cases than controls, statistical analysis of allelic and genotypic features did not reach statistical significance.
analysis showed mild changes in MIR200B secondary structure and increased free energy in the presence of one of the identified variants (g.1167183G>A; rs72563729). Increasing the sample size in future studies may help a more accurate interpretation of the allelic association of MIR200B variations with STDR.
评估MIR200B基因变异与威胁视力的糖尿病视网膜病变(STDR)之间的可能关联。
本研究共纳入141例糖尿病患者,分为两组,其中76例被诊断为STDR的患者归入病例组,65例无STDR的受试者作为对照组。采集外周血标本提取DNA,采用聚合酶链反应扩增MIR200B编码序列。然后,用桑格法对扩增后的DNA进行测序。将测序结果与MIR200B参考序列进行比较,以发现序列变异。使用RNAfold、miRVaS和Mfold生物信息学网络服务器预测所识别变异对RNA结构的潜在影响。
鉴定出两个MIR200B基因变异。虽然在病例组中这两种变异的出现频率均高于对照组,但等位基因和基因型特征的统计学分析未达到统计学显著性。
分析显示,在其中一个已识别变异(g.1167183G>A;rs72563729)存在的情况下,MIR200B二级结构发生轻微变化,自由能增加。未来研究增加样本量可能有助于更准确地解释MIR200B变异与STDR的等位基因关联。