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[高毒力血清型K1噬菌体解聚酶的表达、纯化及功能验证]

[Expression, purification and functional validation of phage depolymerase from hypervirulent serotype K1].

作者信息

Fan Z, Chen Y C, Liu H B, Cui X H, Li Z F, Fu T T, Yuan J

机构信息

Department of Bacteriology, Capital Institute of Pediatrics, Beijing 100020, China.

Department of Bacteriology, Capital Institute of Pediatrics, Beijing 100020, China Graduate School of Peking Union Medical College, Beijing 100730, China.

出版信息

Zhonghua Yu Fang Yi Xue Za Zhi. 2024 Sep 6;58(9):1348-1353. doi: 10.3760/cma.j.cn112150-20240226-00149.

DOI:10.3760/cma.j.cn112150-20240226-00149
PMID:39290015
Abstract

To express and purify the phage depolymerase from hypervirulent (hv) serotype K1 and validate its function. Phage that infected serotype K1-type hv was isolated from hospital sewage. The biology and morphology of the phage were determined by plaque assay and transmission electron microscopy. The whole genome of the phage was sequenced by the Illumina HiSeq 2500 platform. The presence of depolymerase was determined by observing the plaque halo. Bioinformatic analysis and prokaryotic protein expression system were further used to predict and identify phage depolymerase. The depolymerase gene fragment was obtained by PCR and cloned into the pET28a expression vector, and the expression and purification of the depolymerase were completed in strain BL21. The depolymerase activities on the capsular polysaccharide of serotype K1-type hv clinical isolates were detected by plaque assay and low-speed centrifugation assay. A lytic phage (phiA2) that infected serotype K1-type hv clinical isolate was isolated from hospital sewage. It was typical of the Caudovirales order and Autographiviridae family, and its whole genome was 43 526 bp in length and contained 51 coding domain sequences. The phage phiA2-derived depolymerase phiA2-dep was predicted, expressed and purified. The plaque assay and low-speed centrifugation assay indicated that the depolymerase phiA2-dep had good lytic activity on the capsular polysaccharide of serotype K1-type hv clinical isolates. Depolymerase phiA2-dep can specifically degrade the capsular polysaccharide of serotype K1-type hv, which has potential application value in treating bacterial infection.

摘要

表达并纯化高毒力(hv)K1血清型噬菌体解聚酶并验证其功能。从医院污水中分离出感染K1血清型hv的噬菌体。通过噬菌斑测定和透射电子显微镜确定噬菌体的生物学特性和形态。利用Illumina HiSeq 2500平台对噬菌体的全基因组进行测序。通过观察噬菌斑晕圈确定解聚酶的存在。进一步利用生物信息学分析和原核蛋白表达系统预测和鉴定噬菌体解聚酶。通过PCR获得解聚酶基因片段并克隆到pET28a表达载体中,在BL21菌株中完成解聚酶的表达和纯化。通过噬菌斑测定和低速离心测定检测解聚酶对K1血清型hv临床分离株荚膜多糖的活性。从医院污水中分离出一株感染K1血清型hv临床分离株的裂解性噬菌体(phiA2)。它属于长尾噬菌体目和自裂解噬菌体科,其全基因组长度为43526 bp,包含51个编码序列。对噬菌体phiA2衍生的解聚酶phiA2-dep进行了预测、表达和纯化。噬菌斑测定和低速离心测定表明,解聚酶phiA2-dep对K1血清型hv临床分离株的荚膜多糖具有良好的裂解活性。解聚酶phiA2-dep可特异性降解K1血清型hv的荚膜多糖,在治疗细菌感染方面具有潜在应用价值。

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