Mehta Sudhir, Medicherla Krishna Mohan, Gulati Sandhya, Sharma Nidhi, Parveen Rabia, Mishra Ashwani Kumar, Gupta Sonal, Suravajhala Prashanth
Department of General Medicine, SMS Medical College and Hospital, JLN Marg, Jaipur 302004, India.
Department of Biotechnology and Bioinformatics, Birla Institute of Scientific Research, Jaipur 302011, India.
Diseases. 2024 Sep 23;12(9):225. doi: 10.3390/diseases12090225.
Aplastic anaemia (AA) is a rare hypocellular bone marrow disease with a large number of mutations in the telomerase reverse transcriptase gene (TERT), leading to bone marrow failure. We used our benchmarked whole exome sequencing (WES) pipeline to identify variants in adult Indian subjects with apparently acquired AA. For 36 affected individuals, we sequenced coding regions to a mean coverage of 100× and a sufficient depth was achieved. Downstream validation and filtering to call mutations in patients treated with Cyclosporin A (CsA) identified variants associated with AA. We report four mutations across the genes associated with the AA, and , in addition to other genes, viz., , , /, and . We demonstrate the application of WES to discover the variants associated with CsA responders and non-responders in an Indian cohort.
再生障碍性贫血(AA)是一种罕见的骨髓细胞减少性疾病,端粒酶逆转录酶基因(TERT)存在大量突变,导致骨髓衰竭。我们使用经过基准测试的全外显子组测序(WES)流程,在成年印度受试者中鉴定明显获得性AA的变异。对于36名受影响个体,我们对编码区进行测序,平均覆盖度达到100×,并获得了足够的深度。对接受环孢素A(CsA)治疗的患者进行下游验证和筛选以调用突变,从而确定与AA相关的变异。我们报告了与AA相关基因以及其他基因(即 、 、 / 和 )中的四个突变。我们展示了WES在发现印度队列中与CsA反应者和无反应者相关变异方面的应用。